Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus2.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus2.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus2.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus2.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.report.clus2.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus2.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus2.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus2.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus2.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus2.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus2.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus2.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus2.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus2.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus2.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus2.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.report.clus2.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus2.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus2.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus2.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus2.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus2.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus2.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus2.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus2.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus2.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.report.clus2.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus2.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus2.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus2.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus2.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus2.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus2.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus2.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus2.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus2.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus2.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus2.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus2.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus2.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus2.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus2.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus2.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus2.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus2.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus2.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus2.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus2.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus2.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus2.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus2.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus2.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus2.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus2.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.report.clus2.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus2.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.report.clus2.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus2.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus2.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus2.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus2.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus2.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus2.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus2.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus2.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus2.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus2.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus2.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus2.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus2.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus2.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus2.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus2.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus2.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus2.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus2.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus2.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus2.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus2.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus2.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus2.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus2.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus2.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus2.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus2.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus2.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus2.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus2.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus2.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus2.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus2.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus2.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus2.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.report.clus2.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus2.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus2.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.report.clus2.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus2.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.report.clus2.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus2.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus2.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus2.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus2.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus2.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus2.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus2.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus2.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus2.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus2.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus2.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus2.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus2.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus2.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus2.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.report.clus2.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus2.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus2.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus2.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus2.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus2.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus2.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus2.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus2.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus2.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus2.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus2.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus2.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus2.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus2.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.report.clus2.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus2.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus2.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus2.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus2.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus2.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus2.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus2.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus2.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus2.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus2.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus2.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus2.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus2.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus2.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus2.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus2.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus2.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus2.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus2.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus2.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.report.clus2.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus2.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus2.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus2.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.report.clus2.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus2.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus2.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.report.clus2.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus2.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus2.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus2.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus2.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus2.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus2.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus2.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus2.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus2.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus2.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus2.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus2.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus2.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus2.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus2.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus2.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus2.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.report.clus2.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus2.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus2.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus2.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus2.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus2.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus2.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus2.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus2.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus2.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus2.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus2.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus2.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus2.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus2.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus2.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus2.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.report.clus2.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus2.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.report.clus2.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus2.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus2.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus2.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus2.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus2.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus2.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus2.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus2.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus2.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus2.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus2.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus2.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus2.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus2.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus2.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus2.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus2.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus2.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus2.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus2.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus2.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus2.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.report.clus2.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus2.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus2.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus2.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus2.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus2.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus2.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus2.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus2.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus2.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus2.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus2.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.report.clus2.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus2.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus2.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus2.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus2.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus2.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus2.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus2.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus2.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus2.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus2.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus2.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus2.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus2.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus2.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus2.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus2.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus2.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus2.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus2.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.report.clus2.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus2.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.report.clus2.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus2.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.report.clus2.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus2.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus2.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus2.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus2.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus2.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus2.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus2.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus2.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus2.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus2.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus2.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	STAD-TP.mergedcluster.txt	gdac.broadinstitute.org_STAD-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus2.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus2.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus2.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus2.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.report.clus2.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus2.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus2.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus2.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus2.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus2.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus2.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus2.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus2.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus2.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus2.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus2.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.report.clus2.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus2.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus2.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus2.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus2.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus2.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus2.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus2.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus2.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus2.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.report.clus2.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus2.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus2.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus2.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus2.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus2.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus2.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus2.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus2.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus2.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus2.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus2.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus2.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus2.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus2.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus2.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus2.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus2.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus2.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus2.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus2.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus2.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus2.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus2.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus2.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus2.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus2.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus2.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.report.clus2.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus2.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.report.clus2.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus2.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus2.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus2.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus2.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus2.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus2.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus2.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus2.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus2.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus2.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus2.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus2.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus2.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus2.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus2.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus2.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus2.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus2.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus2.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus2.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus2.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus2.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus2.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus2.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus2.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus2.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus2.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus2.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus2.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus2.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus2.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus2.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus2.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus2.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus2.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus2.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.report.clus2.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus2.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus2.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.report.clus2.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus2.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.report.clus2.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus2.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus2.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus2.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus2.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus2.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus2.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus2.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus2.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus2.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus2.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus2.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus2.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus2.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus2.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus2.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.report.clus2.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus2.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus2.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus2.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus2.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus2.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus2.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus2.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus2.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus2.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus2.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus2.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus2.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus2.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus2.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.report.clus2.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus2.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus2.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus2.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus2.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus2.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus2.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus2.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus2.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus2.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus2.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus2.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus2.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus2.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus2.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus2.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus2.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus2.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus2.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus2.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus2.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.report.clus2.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus2.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus2.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus2.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.report.clus2.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus2.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus2.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.report.clus2.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus2.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus2.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus2.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus2.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus2.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus2.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus2.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus2.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus2.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus2.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus2.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus2.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus2.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus2.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus2.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus2.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus2.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.report.clus2.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus2.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus2.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus2.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus2.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus2.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus2.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus2.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus2.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus2.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus2.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus2.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus2.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus2.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus2.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus2.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus2.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.report.clus2.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus2.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.report.clus2.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus2.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus2.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus2.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus2.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus2.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus2.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus2.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus2.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus2.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus2.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus2.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus2.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus2.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus2.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus2.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus2.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus2.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus2.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus2.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus2.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus2.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus2.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.report.clus2.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus2.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus2.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus2.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus2.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus2.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus2.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus2.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus2.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus2.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus2.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus2.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.report.clus2.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus2.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus2.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus2.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus2.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus2.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus2.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus2.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus2.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus2.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus2.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus2.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus2.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus2.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus2.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus2.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus2.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus2.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus2.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus2.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.report.clus2.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus2.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.report.clus2.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus2.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.report.clus2.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus2.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus2.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus2.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus2.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus2.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus2.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus2.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus2.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus2.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus2.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus2.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus2.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus2.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus2.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus2.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.report.clus2.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus2.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus2.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus2.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus2.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus2.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus2.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus2.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus2.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus2.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus2.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus2.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.report.clus2.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus2.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus2.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus2.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus2.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus2.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus2.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus2.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus2.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus2.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.report.clus2.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus2.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus2.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus2.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus2.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus2.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus2.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus2.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus2.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus2.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus2.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus2.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus2.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus2.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus2.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus2.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus2.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus2.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus2.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus2.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus2.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus2.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus2.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus2.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus2.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus2.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus2.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus2.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.report.clus2.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus2.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.report.clus2.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus2.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus2.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus2.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus2.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus2.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus2.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus2.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus2.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus2.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus2.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus2.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus2.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus2.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus2.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus2.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus2.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus2.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus2.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus2.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus2.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus2.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus2.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus2.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus2.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus2.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus2.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus2.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus2.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus2.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus2.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus2.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus2.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus2.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus2.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus2.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus2.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.report.clus2.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus2.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus2.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.report.clus2.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus2.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.report.clus2.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus2.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus2.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus2.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus2.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus2.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus2.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus2.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus2.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus2.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus2.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus2.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus2.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus2.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus2.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus2.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.report.clus2.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus2.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus2.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus2.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus2.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus2.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus2.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus2.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus2.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus2.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus2.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus2.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus2.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus2.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus2.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.report.clus2.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus2.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus2.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus2.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus2.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus2.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus2.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus2.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus2.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus2.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus2.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus2.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus2.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus2.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus2.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus2.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus2.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus2.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus2.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus2.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus2.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.report.clus2.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus2.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus2.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus2.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.report.clus2.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus2.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus2.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.report.clus2.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus2.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus2.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus2.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus2.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus2.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus2.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus2.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus2.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus2.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus2.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus2.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus2.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus2.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus2.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus2.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus2.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus2.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.report.clus2.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus2.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus2.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus2.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus2.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus2.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus2.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus2.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus2.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus2.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus2.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus2.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus2.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus2.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus2.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus2.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus2.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.report.clus2.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus2.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.report.clus2.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus2.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus2.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus2.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus2.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus2.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus2.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus2.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus2.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus2.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus2.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus2.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus2.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus2.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus2.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus2.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus2.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus2.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus2.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus2.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus2.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus2.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus2.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.report.clus2.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus2.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus2.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus2.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus2.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus2.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus2.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus2.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus2.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus2.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus2.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus2.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.report.clus2.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus2.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus2.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus2.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus2.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus2.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus2.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus2.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus2.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus2.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus2.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus2.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus2.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus2.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus2.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus2.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus2.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus2.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus2.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus2.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.report.clus2.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus2.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.report.clus2.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus2.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.report.clus2.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus2.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus2.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus2.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus2.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus2.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus2.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus2.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus2.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus2.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus2.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus2.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.heatmap_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.heatmap_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.volcano_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.heatmap_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus2.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus2.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus2.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus2.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.heatmap_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus2.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus2.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.volcano_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus2.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.volcano_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus2.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus2.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus2.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus2.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus2.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus2.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus2.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus2.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.volcano_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus2.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus2.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus2.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus2.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.volcano_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus2.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus2.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus2.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus2.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RETINOIC_ACID_PATHWAY.heatmap_plot.clus2.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus2.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus2.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.clus2.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus2.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus2.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus2.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus2.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.heatmap_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus2.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus2.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus2.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus2.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.clus2.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus2.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus2.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus2.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus2.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus2.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus2.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus2.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus2.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus2.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus2.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus2.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.volcano_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus2.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus2.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.heatmap_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus2.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus2.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus2.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus2.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus2.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus2.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus2.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus2.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus2.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus2.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus2.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus2.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus2.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus2.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus2.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.volcano_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus2.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.clus2.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus2.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus2.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus2.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus2.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus2.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus2.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus2.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus2.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus2.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus2.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus2.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus2.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus2.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_PHOSPHATE_PATHWAY.heatmap_plot.NON.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus2.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.clus2.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_PATHWAY.heatmap_plot.clus2.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus2.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus2.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus2.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus2.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus2.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus2.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus2.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus2.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus2.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus2.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE.volcano_plot.clus2.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus2.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.clus2.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus2.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus2.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus2.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus2.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus2.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus2.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus2.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus2.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus2.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus2.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus2.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus2.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus2.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus2.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus2.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus2.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus2.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus2.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus2.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus2.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus2.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.heatmap_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus2.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS.volcano_plot.clus2.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus2.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_ACTIVATION.heatmap_plot.clus2.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus2.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus2.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus2.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus2.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION.volcano_plot.clus2.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus2.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus2.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus2.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS.volcano_plot.NON.clus2.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus2.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus2.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus2.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus2.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus2.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus2.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus2.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus2.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus2.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus2.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus2.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus2.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GABA_B_RECEPTOR_ACTIVATION.volcano_plot.clus2.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus2.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus2.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus2.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus2.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus2.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus2.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus2.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus2.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus2.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus2.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus2.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus2.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus2.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus2.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus2.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus2.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus2.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus2.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus2.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus2.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus2.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus2.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus2.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus2.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus2.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus2.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus2.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus2.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus2.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus2.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus2.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus2.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus2.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.clus2.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus2.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus2.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus2.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus2.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM.volcano_plot.clus2.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus2.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus2.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus2.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus2.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus2.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus2.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus2.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus2.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus2.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus2.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus2.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus2.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus2.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus2.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus2.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus2.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus2.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus2.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus2.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus2.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus2.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus2.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus2.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus2.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus2.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus2.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus2.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus2.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus2.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus2.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION.volcano_plot.clus2.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus2.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus2.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus2.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PANCREATIC_CANCER.heatmap_plot.clus2.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus2.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus2.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus2.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus2.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus2.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus2.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus2.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus2.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus2.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus2.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus2.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus2.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus2.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus2.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus2.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus2.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus2.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus2.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus2.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus2.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus2.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus2.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus2.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus2.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus2.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus2.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus2.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus2.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus2.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus2.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus2.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus2.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus2.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus2.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus2.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus2.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus2.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus2.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus2.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus2.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus2.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus2.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus2.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus2.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS.heatmap_plot.clus2.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus2.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus2.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SHC_MEDIATED_CASCADE.heatmap_plot.clus2.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus2.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.NON.clus1.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.volcano_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.NON.clus1.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.NON.clus1.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.NON.clus1.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus1.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus1.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.NON.clus1.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus1.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus1.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHRONIC_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.NON.clus1.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.NON.clus1.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.NON.clus1.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.NON.clus1.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.NON.clus1.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.volcano_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.NON.clus1.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.NON.clus1.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.NON.clus1.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus1.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.NON.clus1.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.NON.clus1.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.NON.clus1.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.NON.clus1.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.NON.clus1.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.NON.clus1.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.NON.clus1.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus1.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.NON.clus1.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.NON.clus1.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus1.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.NON.clus1.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.NON.clus1.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.NON.clus1.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.NON.clus1.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.heatmap_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_AVB3_OPN_PATHWAY.volcano_plot.NON.clus1.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.NON.clus1.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MCALPAIN_PATHWAY.heatmap_plot.NON.clus1.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.NON.clus1.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.NON.clus1.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.NON.clus1.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.NON.clus1.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.NON.clus1.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.NON.clus1.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.NON.clus1.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.NON.clus1.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.NON.clus1.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.NON.clus1.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.NON.clus1.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus1.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.NON.clus1.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.NON.clus1.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.NON.clus1.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BAD_PATHWAY.heatmap_plot.NON.clus1.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.NON.clus1.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.NON.clus1.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.NON.clus1.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.NON.clus1.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.NON.clus1.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.NON.clus1.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.NON.clus1.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.NON.clus1.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.NON.clus1.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.NON.clus1.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.NON.clus1.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.NON.clus1.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.NON.clus1.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.NON.clus1.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus1.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus1.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.NON.clus1.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.NON.clus1.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.NON.clus1.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus1.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.NON.clus1.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.NON.clus1.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus1.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.NON.clus1.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.NON.clus1.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.NON.clus1.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_STEROID_HORMONES_AND_VITAMINS_A_AND_D.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus1.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.NON.clus1.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus1.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.NON.clus1.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.NON.clus1.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus1.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.NON.clus1.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.NON.clus1.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.NON.clus1.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.NON.clus1.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus1.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.NON.clus1.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.NON.clus1.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.NON.clus1.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.NON.clus1.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.NON.clus1.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.NON.clus1.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.NON.clus1.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.NON.clus1.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.NON.clus1.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.NON.clus1.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.NON.clus1.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.NON.clus1.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.NON.clus1.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.NON.clus1.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.NON.clus1.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.NON.clus1.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CDC42_PATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ILK_PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_P53_SIGNALING_PATHWAY.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FRA_PATHWAY.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	STAD-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	STAD-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_STAD-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
