[1] "ofn"        "-oTSTES-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/STES-TP/22555833/STES-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/STES-TP/22532764/transformed.cor.cli.txt"

nPatients in clinical file=628, in cluster file=625, common to both=625
[1]  94 625
[1] "AMP PEAK  1(1P36.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE 
                           101                            524 
  AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE 
                           101                            524 
[1] "AMP PEAK  2(1P34.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE 
                           95                           530 
  AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE 
                           95                           530 
[1] "AMP PEAK  3(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          249                           376 
  AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE 
                          249                           376 
[1] "AMP PEAK  4(1Q42.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE 
                          244                           381 
  AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE 
                          244                           381 
[1] "AMP PEAK  5(2Q12.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE 
                          155                           470 
  AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE 
                          155                           470 
[1] "AMP PEAK  6(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          287                           338 
  AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE 
                          287                           338 
[1] "AMP PEAK  7(5P15.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           228                            397 
  AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE 
                           228                            397 
[1] "AMP PEAK  8(5P13.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE 
                          216                           409 
  AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE 
                          216                           409 
[1] "AMP PEAK  9(6P21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                          192                           433 
  AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE 
                          192                           433 
[1] "AMP PEAK 10(6Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        141                         484 
  AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE 
                        141                         484 
[1] "AMP PEAK 11(6Q21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                        111                         514 
  AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE 
                        111                         514 
[1] "AMP PEAK 12(7P22.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE 
                          353                           272 
  AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE 
                          353                           272 
[1] "AMP PEAK 13(7P11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE 
                          339                           286 
  AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE 
                          339                           286 
[1] "AMP PEAK 14(7Q21.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE 
                          317                           308 
  AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE 
                          317                           308 
[1] "AMP PEAK 15(8P23.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE 
                          229                           396 
  AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE 
                          229                           396 
[1] "AMP PEAK 16(8P11.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE 
                           272                            353 
  AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE 
                           272                            353 
[1] "AMP PEAK 17(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE 
                           454                            171 
  AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE 
                           454                            171 
[1] "AMP PEAK 18(9P24.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE 
                           91                           534 
  AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE 
                           91                           534 
[1] "AMP PEAK 19(9P13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE 
                          132                           493 
  AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE 
                          132                           493 
[1] "AMP PEAK 20(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE 
                          185                           440 
  AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE 
                          185                           440 
[1] "AMP PEAK 21(10P11.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE 
                            169                             456 
  AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE 
                            169                             456 
[1] "AMP PEAK 22(10Q22.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE 
                           125                            500 
  AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE 
                           125                            500 
[1] "AMP PEAK 23(10Q26.13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE 
                            119                             506 
  AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE 
                            119                             506 
[1] "AMP PEAK 24(11P13) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE 
                         138                          487 
  AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE 
                         138                          487 
[1] "AMP PEAK 25(11Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE 
                           218                            407 
  AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE 
                           218                            407 
[1] "AMP PEAK 26(12P12.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE 
                           207                            418 
  AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE 
                           207                            418 
[1] "AMP PEAK 27(12Q15) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE 
                         161                          464 
  AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE 
                         161                          464 
[1] "AMP PEAK 28(13Q12.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE 
                           216                            409 
  AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE 
                           216                            409 
[1] "AMP PEAK 29(13Q22.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE 
                           243                            382 
  AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE 
                           243                            382 
[1] "AMP PEAK 30(14Q13.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE 
                           113                            512 
  AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE 
                           113                            512 
[1] "AMP PEAK 31(15Q26.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE 
                           168                            457 
  AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE 
                           168                            457 
[1] "AMP PEAK 32(17Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE 
                         222                          403 
  AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE 
                         222                          403 
[1] "AMP PEAK 33(18P11.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE 
                            178                             447 
  AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE 
                            178                             447 
[1] "AMP PEAK 34(18Q11.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE 
                           198                            427 
  AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE 
                           198                            427 
[1] "AMP PEAK 35(19Q12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE 
                         185                          440 
  AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE 
                         185                          440 
[1] "AMP PEAK 36(19Q13.43) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE 
                            164                             461 
  AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE 
                            164                             461 
[1] "AMP PEAK 37(20Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE 
                           416                            209 
  AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE 
                           416                            209 
[1] "AMP PEAK 38(XQ28) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE 
                        155                         470 
  AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE 
                        155                         470 
[1] "DEL PEAK  1(1P36.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           210                            415 
  DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE 
                           210                            415 
[1] "DEL PEAK  2(1P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          156                           469 
  DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE 
                          156                           469 
[1] "DEL PEAK  3(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         46                         579 
  DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE 
                         46                         579 
[1] "DEL PEAK  4(1Q44) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE 
                         43                         582 
  DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE 
                         43                         582 
[1] "DEL PEAK  5(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                          126                           499 
  DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE 
                          126                           499 
[1] "DEL PEAK  6(2Q32.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE 
                           87                           538 
  DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE 
                           87                           538 
[1] "DEL PEAK  7(2Q33.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE 
                           85                           540 
  DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE 
                           85                           540 
[1] "DEL PEAK  8(2Q37.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE 
                          122                           503 
  DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE 
                          122                           503 
[1] "DEL PEAK  9(3P26.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE 
                          250                           375 
  DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE 
                          250                           375 
[1] "DEL PEAK 10(3P14.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE 
                          282                           343 
  DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE 
                          282                           343 
[1] "DEL PEAK 11(3Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE 
                           98                           527 
  DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE 
                           98                           527 
[1] "DEL PEAK 12(3Q26.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE 
                            65                            560 
  DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE 
                            65                            560 
[1] "DEL PEAK 13(4P16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE 
                          271                           354 
  DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE 
                          271                           354 
[1] "DEL PEAK 14(4P15.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE 
                          269                           356 
  DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE 
                          269                           356 
[1] "DEL PEAK 15(4Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE 
                          298                           327 
  DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE 
                          298                           327 
[1] "DEL PEAK 16(4Q34.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE 
                          300                           325 
  DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE 
                          300                           325 
[1] "DEL PEAK 17(5Q12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE 
                          282                           343 
  DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE 
                          282                           343 
[1] "DEL PEAK 18(6P25.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE 
                          188                           437 
  DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE 
                          188                           437 
[1] "DEL PEAK 19(6Q16.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE 
                          147                           478 
  DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE 
                          147                           478 
[1] "DEL PEAK 20(6Q26) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE 
                        152                         473 
  DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE 
                        152                         473 
[1] "DEL PEAK 21(7Q31.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE 
                          127                           498 
  DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE 
                          127                           498 
[1] "DEL PEAK 22(7Q36.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE 
                          165                           460 
  DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE 
                          165                           460 
[1] "DEL PEAK 23(8P23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE 
                          214                           411 
  DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE 
                          214                           411 
[1] "DEL PEAK 24(9P23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE 
                        302                         323 
  DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE 
                        302                         323 
[1] "DEL PEAK 25(9P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE 
                          334                           291 
  DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE 
                          334                           291 
[1] "DEL PEAK 26(9Q21.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE 
                           175                            450 
  DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE 
                           175                            450 
[1] "DEL PEAK 27(10P15.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE 
                           131                            494 
  DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE 
                           131                            494 
[1] "DEL PEAK 28(10P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE 
                            102                             523 
  DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE 
                            102                             523 
[1] "DEL PEAK 29(10Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE 
                           135                            490 
  DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE 
                           135                            490 
[1] "DEL PEAK 30(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE 
                            183                             442 
  DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE 
                            183                             442 
[1] "DEL PEAK 31(11P15.5) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE 
                           175                            450 
  DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE 
                           175                            450 
[1] "DEL PEAK 32(11Q25) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE 
                         178                          447 
  DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE 
                         178                          447 
[1] "DEL PEAK 33(12P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE 
                           113                            512 
  DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE 
                           113                            512 
[1] "DEL PEAK 34(12Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE 
                           110                            515 
  DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE 
                           110                            515 
[1] "DEL PEAK 35(13Q12.11) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE 
                            138                             487 
  DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE 
                            138                             487 
[1] "DEL PEAK 36(13Q21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE 
                            126                             499 
  DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE 
                            126                             499 
[1] "DEL PEAK 37(14Q23.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE 
                           187                            438 
  DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE 
                           187                            438 
[1] "DEL PEAK 38(15Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE 
                           183                            442 
  DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE 
                           183                            442 
[1] "DEL PEAK 39(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE 
                           177                            448 
  DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE 
                           177                            448 
[1] "DEL PEAK 40(16P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE 
                           153                            472 
  DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE 
                           153                            472 
[1] "DEL PEAK 41(16Q23.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE 
                           265                            360 
  DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE 
                           265                            360 
[1] "DEL PEAK 42(17P12) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE 
                         267                          358 
  DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE 
                         267                          358 
[1] "DEL PEAK 43(17Q24.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE 
                           103                            522 
  DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE 
                           103                            522 
[1] "DEL PEAK 44(18Q12.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE 
                           292                            333 
  DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE 
                           292                            333 
[1] "DEL PEAK 45(18Q21.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE 
                           323                            302 
  DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE 
                           323                            302 
[1] "DEL PEAK 46(19P13.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE 
                           249                            376 
  DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE 
                           249                            376 
[1] "DEL PEAK 47(20P12.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE 
                            72                            553 
  DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE 
                            72                            553 
[1] "DEL PEAK 48(21Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE 
                           286                            339 
  DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE 
                           286                            339 
[1] "DEL PEAK 49(21Q22.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE 
                            305                             320 
  DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE 
                            305                             320 
[1] "DEL PEAK 50(22Q11.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                           230                            395 
  DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE 
                           230                            395 
[1] "DEL PEAK 51(22Q13.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE 
                            235                             390 
  DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE 
                            235                             390 
[1] "DEL PEAK 52(XP22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE 
                          151                           474 
  DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE 
                          151                           474 
[1] "DEL PEAK 53(XP21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE 
                          146                           479 
  DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE 
                          146                           479 
[1] "DEL PEAK 54(XP11.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE 
                          148                           477 
  DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE 
                          148                           477 
[1] "DEL PEAK 55(XQ11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE 
                          105                           520 
  DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE 
                          105                           520 
[1] "DEL PEAK 56(XQ21.33) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE 
                            98                            527 
  DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE 
                            98                            527 
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 625 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 625 columns, 0 survival variables, and 10 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE

Clustering(1) Variable = AMP PEAK  1(1P36.22) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.22) MUTATED       40     25     32      4
  AMP PEAK  1(1P36.22) WILD-TYPE    111     73    150    190
D1V1, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           40                            111
  CLUS_2                           25                             73
  CLUS_3                           32                            150
  CLUS_4                            4                            190
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.22) MUTATED       40     37     16
  AMP PEAK  1(1P36.22) WILD-TYPE    201    124    159
D1V2, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           40                            201
  CLUS_2                           37                            124
  CLUS_3                           16                            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  1(1P36.22) MUTATED       28     27     20      8
  AMP PEAK  1(1P36.22) WILD-TYPE    117    110    116     56
D1V3, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           28                            117
  CLUS_2                           27                            110
  CLUS_3                           20                            116
  CLUS_4                            8                             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.22) MUTATED       53     16     14
  AMP PEAK  1(1P36.22) WILD-TYPE    220     94     85
D1V4, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           53                            220
  CLUS_2                           16                             94
  CLUS_3                           14                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.22) MUTATED       30     48     19
  AMP PEAK  1(1P36.22) WILD-TYPE    140    225    134
D1V5, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           30                            140
  CLUS_2                           48                            225
  CLUS_3                           19                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P36.22) MUTATED       37     24     11     19      6
  AMP PEAK  1(1P36.22) WILD-TYPE     94     92     87    102    124
D1V6, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           37                             94
  CLUS_2                           24                             92
  CLUS_3                           11                             87
  CLUS_4                           19                            102
  CLUS_5                            6                            124
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  1(1P36.22) MUTATED       33     48     18
  AMP PEAK  1(1P36.22) WILD-TYPE    134    230    154
D1V7, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           33                            134
  CLUS_2                           48                            230
  CLUS_3                           18                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P36.22) MUTATED       34     29     17     13      6
  AMP PEAK  1(1P36.22) WILD-TYPE     93    114    147     81     83
D1V8, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           34                             93
  CLUS_2                           29                            114
  CLUS_3                           17                            147
  CLUS_4                           13                             81
  CLUS_5                            6                             83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P36.22) MUTATED       25     33     12      6      7
  AMP PEAK  1(1P36.22) WILD-TYPE     98    122    109     41     66
D1V9, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           25                             98
  CLUS_2                           33                            122
  CLUS_3                           12                            109
  CLUS_4                            6                             41
  CLUS_5                            7                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  1(1P36.22) MUTATED       12     29     18     11     13
  AMP PEAK  1(1P36.22) WILD-TYPE     39     95    126     97     79
D1V10, multiclass
        clus
vv       AMP PEAK  1(1P36.22) MUTATED AMP PEAK  1(1P36.22) WILD-TYPE
  CLUS_1                           12                             39
  CLUS_2                           29                             95
  CLUS_3                           18                            126
  CLUS_4                           11                             97
  CLUS_5                           13                             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = AMP PEAK  2(1P34.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1P34.2) MUTATED       24     30     36      5
  AMP PEAK  2(1P34.2) WILD-TYPE    127     68    146    189
D2V1, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          24                           127
  CLUS_2                          30                            68
  CLUS_3                          36                           146
  CLUS_4                           5                           189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P34.2) MUTATED       34     38     17
  AMP PEAK  2(1P34.2) WILD-TYPE    207    123    158
D2V2, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          34                           207
  CLUS_2                          38                           123
  CLUS_3                          17                           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  2(1P34.2) MUTATED       18     20     22     12
  AMP PEAK  2(1P34.2) WILD-TYPE    127    117    114     52
D2V3, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          18                           127
  CLUS_2                          20                           117
  CLUS_3                          22                           114
  CLUS_4                          12                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P34.2) MUTATED       41     17     14
  AMP PEAK  2(1P34.2) WILD-TYPE    232     93     85
D2V4, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          41                           232
  CLUS_2                          17                            93
  CLUS_3                          14                            85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P34.2) MUTATED       30     44     17
  AMP PEAK  2(1P34.2) WILD-TYPE    140    229    136
D2V5, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          30                           140
  CLUS_2                          44                           229
  CLUS_3                          17                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P34.2) MUTATED       29     26      6     22      8
  AMP PEAK  2(1P34.2) WILD-TYPE    102     90     92     99    122
D2V6, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          29                           102
  CLUS_2                          26                            90
  CLUS_3                           6                            92
  CLUS_4                          22                            99
  CLUS_5                           8                           122
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  2(1P34.2) MUTATED       33     41     20
  AMP PEAK  2(1P34.2) WILD-TYPE    134    237    152
D2V7, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          33                           134
  CLUS_2                          41                           237
  CLUS_3                          20                           152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P34.2) MUTATED       28     22     15     19     10
  AMP PEAK  2(1P34.2) WILD-TYPE     99    121    149     75     79
D2V8, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          28                            99
  CLUS_2                          22                           121
  CLUS_3                          15                           149
  CLUS_4                          19                            75
  CLUS_5                          10                            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P34.2) MUTATED       30     26     13      6      3
  AMP PEAK  2(1P34.2) WILD-TYPE     93    129    108     41     70
D2V9, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          30                            93
  CLUS_2                          26                           129
  CLUS_3                          13                           108
  CLUS_4                           6                            41
  CLUS_5                           3                            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  2(1P34.2) MUTATED       14     24     11     10     19
  AMP PEAK  2(1P34.2) WILD-TYPE     37    100    133     98     73
D2V10, multiclass
        clus
vv       AMP PEAK  2(1P34.2) MUTATED AMP PEAK  2(1P34.2) WILD-TYPE
  CLUS_1                          14                            37
  CLUS_2                          24                           100
  CLUS_3                          11                           133
  CLUS_4                          10                            98
  CLUS_5                          19                            73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = AMP PEAK  3(1Q21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q21.3) MUTATED       75     54    103     17
  AMP PEAK  3(1Q21.3) WILD-TYPE     76     44     79    177
D3V1, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          75                            76
  CLUS_2                          54                            44
  CLUS_3                         103                            79
  CLUS_4                          17                           177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       96    100     36
  AMP PEAK  3(1Q21.3) WILD-TYPE    145     61    139
D3V2, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          96                           145
  CLUS_2                         100                            61
  CLUS_3                          36                           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  3(1Q21.3) MUTATED       60     56     51     24
  AMP PEAK  3(1Q21.3) WILD-TYPE     85     81     85     40
D3V3, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          60                            85
  CLUS_2                          56                            81
  CLUS_3                          51                            85
  CLUS_4                          24                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED      123     39     29
  AMP PEAK  3(1Q21.3) WILD-TYPE    150     71     70
D3V4, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                         123                           150
  CLUS_2                          39                            71
  CLUS_3                          29                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       74    123     43
  AMP PEAK  3(1Q21.3) WILD-TYPE     96    150    110
D3V5, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          74                            96
  CLUS_2                         123                           150
  CLUS_3                          43                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED       72     50     37     55     26
  AMP PEAK  3(1Q21.3) WILD-TYPE     59     66     61     66    104
D3V6, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          72                            59
  CLUS_2                          50                            66
  CLUS_3                          37                            61
  CLUS_4                          55                            66
  CLUS_5                          26                           104
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  3(1Q21.3) MUTATED       87    113     45
  AMP PEAK  3(1Q21.3) WILD-TYPE     80    165    127
D3V7, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          87                            80
  CLUS_2                         113                           165
  CLUS_3                          45                           127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED       75     73     31     45     21
  AMP PEAK  3(1Q21.3) WILD-TYPE     52     70    133     49     68
D3V8, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          75                            52
  CLUS_2                          73                            70
  CLUS_3                          31                           133
  CLUS_4                          45                            49
  CLUS_5                          21                            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED       67     72     33     14     20
  AMP PEAK  3(1Q21.3) WILD-TYPE     56     83     88     33     53
D3V9, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          67                            56
  CLUS_2                          72                            83
  CLUS_3                          33                            88
  CLUS_4                          14                            33
  CLUS_5                          20                            53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  3(1Q21.3) MUTATED       26     66     35     34     45
  AMP PEAK  3(1Q21.3) WILD-TYPE     25     58    109     74     47
D3V10, multiclass
        clus
vv       AMP PEAK  3(1Q21.3) MUTATED AMP PEAK  3(1Q21.3) WILD-TYPE
  CLUS_1                          26                            25
  CLUS_2                          66                            58
  CLUS_3                          35                           109
  CLUS_4                          34                            74
  CLUS_5                          45                            47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = AMP PEAK  4(1Q42.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q42.3) MUTATED       81     52     93     18
  AMP PEAK  4(1Q42.3) WILD-TYPE     70     46     89    176
D4V1, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          81                            70
  CLUS_2                          52                            46
  CLUS_3                          93                            89
  CLUS_4                          18                           176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q42.3) MUTATED       83    101     44
  AMP PEAK  4(1Q42.3) WILD-TYPE    158     60    131
D4V2, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          83                           158
  CLUS_2                         101                            60
  CLUS_3                          44                           131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  4(1Q42.3) MUTATED       55     56     49     28
  AMP PEAK  4(1Q42.3) WILD-TYPE     90     81     87     36
D4V3, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          55                            90
  CLUS_2                          56                            81
  CLUS_3                          49                            87
  CLUS_4                          28                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q42.3) MUTATED      118     41     29
  AMP PEAK  4(1Q42.3) WILD-TYPE    155     69     70
D4V4, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                         118                           155
  CLUS_2                          41                            69
  CLUS_3                          29                            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q42.3) MUTATED       83    108     43
  AMP PEAK  4(1Q42.3) WILD-TYPE     87    165    110
D4V5, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          83                            87
  CLUS_2                         108                           165
  CLUS_3                          43                           110
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(1Q42.3) MUTATED       70     38     36     59     31
  AMP PEAK  4(1Q42.3) WILD-TYPE     61     78     62     62     99
D4V6, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          70                            61
  CLUS_2                          38                            78
  CLUS_3                          36                            62
  CLUS_4                          59                            62
  CLUS_5                          31                            99
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  4(1Q42.3) MUTATED       94     97     50
  AMP PEAK  4(1Q42.3) WILD-TYPE     73    181    122
D4V7, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          94                            73
  CLUS_2                          97                           181
  CLUS_3                          50                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(1Q42.3) MUTATED       78     64     25     50     24
  AMP PEAK  4(1Q42.3) WILD-TYPE     49     79    139     44     65
D4V8, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          78                            49
  CLUS_2                          64                            79
  CLUS_3                          25                           139
  CLUS_4                          50                            44
  CLUS_5                          24                            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(1Q42.3) MUTATED       73     63     33     17     20
  AMP PEAK  4(1Q42.3) WILD-TYPE     50     92     88     30     53
D4V9, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          73                            50
  CLUS_2                          63                            92
  CLUS_3                          33                            88
  CLUS_4                          17                            30
  CLUS_5                          20                            53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  4(1Q42.3) MUTATED       30     56     33     38     49
  AMP PEAK  4(1Q42.3) WILD-TYPE     21     68    111     70     43
D4V10, multiclass
        clus
vv       AMP PEAK  4(1Q42.3) MUTATED AMP PEAK  4(1Q42.3) WILD-TYPE
  CLUS_1                          30                            21
  CLUS_2                          56                            68
  CLUS_3                          33                           111
  CLUS_4                          38                            70
  CLUS_5                          49                            43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = AMP PEAK  5(2Q12.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q12.2) MUTATED       50     28     68      9
  AMP PEAK  5(2Q12.2) WILD-TYPE    101     70    114    185
D5V1, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          50                           101
  CLUS_2                          28                            70
  CLUS_3                          68                           114
  CLUS_4                           9                           185
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q12.2) MUTATED       57     63     27
  AMP PEAK  5(2Q12.2) WILD-TYPE    184     98    148
D5V2, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          57                           184
  CLUS_2                          63                            98
  CLUS_3                          27                           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  5(2Q12.2) MUTATED       30     33     28     19
  AMP PEAK  5(2Q12.2) WILD-TYPE    115    104    108     45
D5V3, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          30                           115
  CLUS_2                          33                           104
  CLUS_3                          28                           108
  CLUS_4                          19                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q12.2) MUTATED       62     28     20
  AMP PEAK  5(2Q12.2) WILD-TYPE    211     82     79
D5V4, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          62                           211
  CLUS_2                          28                            82
  CLUS_3                          20                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q12.2) MUTATED       60     71     22
  AMP PEAK  5(2Q12.2) WILD-TYPE    110    202    131
D5V5, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          60                           110
  CLUS_2                          71                           202
  CLUS_3                          22                           131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q12.2) MUTATED       44     22     23     48     16
  AMP PEAK  5(2Q12.2) WILD-TYPE     87     94     75     73    114
D5V6, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          44                            87
  CLUS_2                          22                            94
  CLUS_3                          23                            75
  CLUS_4                          48                            73
  CLUS_5                          16                           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  5(2Q12.2) MUTATED       62     64     28
  AMP PEAK  5(2Q12.2) WILD-TYPE    105    214    144
D5V7, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          62                           105
  CLUS_2                          64                           214
  CLUS_3                          28                           144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q12.2) MUTATED       41     36     26     39     12
  AMP PEAK  5(2Q12.2) WILD-TYPE     86    107    138     55     77
D5V8, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          41                            86
  CLUS_2                          36                           107
  CLUS_3                          26                           138
  CLUS_4                          39                            55
  CLUS_5                          12                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q12.2) MUTATED       49     42     24      9     10
  AMP PEAK  5(2Q12.2) WILD-TYPE     74    113     97     38     63
D5V9, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          49                            74
  CLUS_2                          42                           113
  CLUS_3                          24                            97
  CLUS_4                           9                            38
  CLUS_5                          10                            63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  5(2Q12.2) MUTATED       15     37     27     17     38
  AMP PEAK  5(2Q12.2) WILD-TYPE     36     87    117     91     54
D5V10, multiclass
        clus
vv       AMP PEAK  5(2Q12.2) MUTATED AMP PEAK  5(2Q12.2) WILD-TYPE
  CLUS_1                          15                            36
  CLUS_2                          37                            87
  CLUS_3                          27                           117
  CLUS_4                          17                            91
  CLUS_5                          38                            54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = AMP PEAK  6(3Q26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       50     65    143     29
  AMP PEAK  6(3Q26.2) WILD-TYPE    101     33     39    165
D6V1, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          50                           101
  CLUS_2                          65                            33
  CLUS_3                         143                            39
  CLUS_4                          29                           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED       98    117     53
  AMP PEAK  6(3Q26.2) WILD-TYPE    143     44    122
D6V2, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          98                           143
  CLUS_2                         117                            44
  CLUS_3                          53                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  6(3Q26.2) MUTATED       60     69     63     28
  AMP PEAK  6(3Q26.2) WILD-TYPE     85     68     73     36
D6V3, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          60                            85
  CLUS_2                          69                            68
  CLUS_3                          63                            73
  CLUS_4                          28                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED      126     50     44
  AMP PEAK  6(3Q26.2) WILD-TYPE    147     60     55
D6V4, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         126                           147
  CLUS_2                          50                            60
  CLUS_3                          44                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED      111    119     48
  AMP PEAK  6(3Q26.2) WILD-TYPE     59    154    105
D6V5, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         111                            59
  CLUS_2                         119                           154
  CLUS_3                          48                           105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       68     62     25     86     37
  AMP PEAK  6(3Q26.2) WILD-TYPE     63     54     73     35     93
D6V6, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          68                            63
  CLUS_2                          62                            54
  CLUS_3                          25                            73
  CLUS_4                          86                            35
  CLUS_5                          37                            93
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  6(3Q26.2) MUTATED      117    109     58
  AMP PEAK  6(3Q26.2) WILD-TYPE     50    169    114
D6V7, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                         117                            50
  CLUS_2                         109                           169
  CLUS_3                          58                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       62     57     60     81     24
  AMP PEAK  6(3Q26.2) WILD-TYPE     65     86    104     13     65
D6V8, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          62                            65
  CLUS_2                          57                            86
  CLUS_3                          60                           104
  CLUS_4                          81                            13
  CLUS_5                          24                            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       90     71     42     20     21
  AMP PEAK  6(3Q26.2) WILD-TYPE     33     84     79     27     52
D6V9, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          90                            33
  CLUS_2                          71                            84
  CLUS_3                          42                            79
  CLUS_4                          20                            27
  CLUS_5                          21                            52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  6(3Q26.2) MUTATED       25     56     50     33     80
  AMP PEAK  6(3Q26.2) WILD-TYPE     26     68     94     75     12
D6V10, multiclass
        clus
vv       AMP PEAK  6(3Q26.2) MUTATED AMP PEAK  6(3Q26.2) WILD-TYPE
  CLUS_1                          25                            26
  CLUS_2                          56                            68
  CLUS_3                          50                            94
  CLUS_4                          33                            75
  CLUS_5                          80                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = AMP PEAK  7(5P15.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       67     28    116     17
  AMP PEAK  7(5P15.33) WILD-TYPE     84     70     66    177
D7V1, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           67                             84
  CLUS_2                           28                             70
  CLUS_3                          116                             66
  CLUS_4                           17                            177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       69    106     40
  AMP PEAK  7(5P15.33) WILD-TYPE    172     55    135
D7V2, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           69                            172
  CLUS_2                          106                             55
  CLUS_3                           40                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  7(5P15.33) MUTATED       57     53     39     20
  AMP PEAK  7(5P15.33) WILD-TYPE     88     84     97     44
D7V3, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           57                             88
  CLUS_2                           53                             84
  CLUS_3                           39                             97
  CLUS_4                           20                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED      112     32     25
  AMP PEAK  7(5P15.33) WILD-TYPE    161     78     74
D7V4, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                          112                            161
  CLUS_2                           32                             78
  CLUS_3                           25                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       87    101     34
  AMP PEAK  7(5P15.33) WILD-TYPE     83    172    119
D7V5, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           87                             83
  CLUS_2                          101                            172
  CLUS_3                           34                            119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P15.33) MUTATED       67     35     29     67     24
  AMP PEAK  7(5P15.33) WILD-TYPE     64     81     69     54    106
D7V6, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           67                             64
  CLUS_2                           35                             81
  CLUS_3                           29                             69
  CLUS_4                           67                             54
  CLUS_5                           24                            106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  7(5P15.33) MUTATED       95     87     44
  AMP PEAK  7(5P15.33) WILD-TYPE     72    191    128
D7V7, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           95                             72
  CLUS_2                           87                            191
  CLUS_3                           44                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P15.33) MUTATED       66     42     37     63     18
  AMP PEAK  7(5P15.33) WILD-TYPE     61    101    127     31     71
D7V8, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           66                             61
  CLUS_2                           42                            101
  CLUS_3                           37                            127
  CLUS_4                           63                             31
  CLUS_5                           18                             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P15.33) MUTATED       75     58     28     16     23
  AMP PEAK  7(5P15.33) WILD-TYPE     48     97     93     31     50
D7V9, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           75                             48
  CLUS_2                           58                             97
  CLUS_3                           28                             93
  CLUS_4                           16                             31
  CLUS_5                           23                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  7(5P15.33) MUTATED       24     46     43     24     63
  AMP PEAK  7(5P15.33) WILD-TYPE     27     78    101     84     29
D7V10, multiclass
        clus
vv       AMP PEAK  7(5P15.33) MUTATED AMP PEAK  7(5P15.33) WILD-TYPE
  CLUS_1                           24                             27
  CLUS_2                           46                             78
  CLUS_3                           43                            101
  CLUS_4                           24                             84
  CLUS_5                           63                             29
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = AMP PEAK  8(5P13.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P13.1) MUTATED       66     31    103     16
  AMP PEAK  8(5P13.1) WILD-TYPE     85     67     79    178
D8V1, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          66                            85
  CLUS_2                          31                            67
  CLUS_3                         103                            79
  CLUS_4                          16                           178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P13.1) MUTATED       64     94     43
  AMP PEAK  8(5P13.1) WILD-TYPE    177     67    132
D8V2, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          64                           177
  CLUS_2                          94                            67
  CLUS_3                          43                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  8(5P13.1) MUTATED       46     48     46     22
  AMP PEAK  8(5P13.1) WILD-TYPE     99     89     90     42
D8V3, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          46                            99
  CLUS_2                          48                            89
  CLUS_3                          46                            90
  CLUS_4                          22                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P13.1) MUTATED      102     29     31
  AMP PEAK  8(5P13.1) WILD-TYPE    171     81     68
D8V4, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                         102                           171
  CLUS_2                          29                            81
  CLUS_3                          31                            68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P13.1) MUTATED       82     89     38
  AMP PEAK  8(5P13.1) WILD-TYPE     88    184    115
D8V5, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          82                            88
  CLUS_2                          89                           184
  CLUS_3                          38                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P13.1) MUTATED       64     29     25     63     28
  AMP PEAK  8(5P13.1) WILD-TYPE     67     87     73     58    102
D8V6, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          64                            67
  CLUS_2                          29                            87
  CLUS_3                          25                            73
  CLUS_4                          63                            58
  CLUS_5                          28                           102
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  8(5P13.1) MUTATED       87     78     50
  AMP PEAK  8(5P13.1) WILD-TYPE     80    200    122
D8V7, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          87                            80
  CLUS_2                          78                           200
  CLUS_3                          50                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P13.1) MUTATED       65     37     37     55     21
  AMP PEAK  8(5P13.1) WILD-TYPE     62    106    127     39     68
D8V8, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          65                            62
  CLUS_2                          37                           106
  CLUS_3                          37                           127
  CLUS_4                          55                            39
  CLUS_5                          21                            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P13.1) MUTATED       66     52     32     19     20
  AMP PEAK  8(5P13.1) WILD-TYPE     57    103     89     28     53
D8V9, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          66                            57
  CLUS_2                          52                           103
  CLUS_3                          32                            89
  CLUS_4                          19                            28
  CLUS_5                          20                            53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  8(5P13.1) MUTATED       22     40     44     28     55
  AMP PEAK  8(5P13.1) WILD-TYPE     29     84    100     80     37
D8V10, multiclass
        clus
vv       AMP PEAK  8(5P13.1) MUTATED AMP PEAK  8(5P13.1) WILD-TYPE
  CLUS_1                          22                            29
  CLUS_2                          40                            84
  CLUS_3                          44                           100
  CLUS_4                          28                            80
  CLUS_5                          55                            37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = AMP PEAK  9(6P21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       75     40     65     12
  AMP PEAK  9(6P21.1) WILD-TYPE     76     58    117    182
D9V1, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          75                            76
  CLUS_2                          40                            58
  CLUS_3                          65                           117
  CLUS_4                          12                           182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       79     70     27
  AMP PEAK  9(6P21.1) WILD-TYPE    162     91    148
D9V2, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          79                           162
  CLUS_2                          70                            91
  CLUS_3                          27                           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK  9(6P21.1) MUTATED       45     50     29     24
  AMP PEAK  9(6P21.1) WILD-TYPE    100     87    107     40
D9V3, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          45                           100
  CLUS_2                          50                            87
  CLUS_3                          29                           107
  CLUS_4                          24                            40
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       88     41     19
  AMP PEAK  9(6P21.1) WILD-TYPE    185     69     80
D9V4, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          88                           185
  CLUS_2                          41                            69
  CLUS_3                          19                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       56    104     26
  AMP PEAK  9(6P21.1) WILD-TYPE    114    169    127
D9V5, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          56                           114
  CLUS_2                         104                           169
  CLUS_3                          26                           127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       62     42     30     39     13
  AMP PEAK  9(6P21.1) WILD-TYPE     69     74     68     82    117
D9V6, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          62                            69
  CLUS_2                          42                            74
  CLUS_3                          30                            68
  CLUS_4                          39                            82
  CLUS_5                          13                           117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK  9(6P21.1) MUTATED       61     96     32
  AMP PEAK  9(6P21.1) WILD-TYPE    106    182    140
D9V7, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          61                           106
  CLUS_2                          96                           182
  CLUS_3                          32                           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       67     56     28     26     12
  AMP PEAK  9(6P21.1) WILD-TYPE     60     87    136     68     77
D9V8, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          67                            60
  CLUS_2                          56                            87
  CLUS_3                          28                           136
  CLUS_4                          26                            68
  CLUS_5                          12                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       49     65     21     14     16
  AMP PEAK  9(6P21.1) WILD-TYPE     74     90    100     33     57
D9V9, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          49                            74
  CLUS_2                          65                            90
  CLUS_3                          21                           100
  CLUS_4                          14                            33
  CLUS_5                          16                            57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK  9(6P21.1) MUTATED       26     63     28     22     26
  AMP PEAK  9(6P21.1) WILD-TYPE     25     61    116     86     66
D9V10, multiclass
        clus
vv       AMP PEAK  9(6P21.1) MUTATED AMP PEAK  9(6P21.1) WILD-TYPE
  CLUS_1                          26                            25
  CLUS_2                          63                            61
  CLUS_3                          28                           116
  CLUS_4                          22                            86
  CLUS_5                          26                            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = AMP PEAK 10(6Q12) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       61     28     44      8
  AMP PEAK 10(6Q12) WILD-TYPE     90     70    138    186
D10V1, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        61                          90
  CLUS_2                        28                          70
  CLUS_3                        44                         138
  CLUS_4                         8                         186
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       54     56     17
  AMP PEAK 10(6Q12) WILD-TYPE    187    105    158
D10V2, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        54                         187
  CLUS_2                        56                         105
  CLUS_3                        17                         158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 10(6Q12) MUTATED       36     33     24     14
  AMP PEAK 10(6Q12) WILD-TYPE    109    104    112     50
D10V3, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        36                         109
  CLUS_2                        33                         104
  CLUS_3                        24                         112
  CLUS_4                        14                          50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       67     24     16
  AMP PEAK 10(6Q12) WILD-TYPE    206     86     83
D10V4, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        67                         206
  CLUS_2                        24                          86
  CLUS_3                        16                          83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       44     71     23
  AMP PEAK 10(6Q12) WILD-TYPE    126    202    130
D10V5, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        44                         126
  CLUS_2                        71                         202
  CLUS_3                        23                         130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q12) MUTATED       48     27     21     31     11
  AMP PEAK 10(6Q12) WILD-TYPE     83     89     77     90    119
D10V6, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        48                          83
  CLUS_2                        27                          89
  CLUS_3                        21                          77
  CLUS_4                        31                          90
  CLUS_5                        11                         119
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 10(6Q12) MUTATED       49     60     30
  AMP PEAK 10(6Q12) WILD-TYPE    118    218    142
D10V7, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        49                         118
  CLUS_2                        60                         218
  CLUS_3                        30                         142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q12) MUTATED       50     37     20     22     10
  AMP PEAK 10(6Q12) WILD-TYPE     77    106    144     72     79
D10V8, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        50                          77
  CLUS_2                        37                         106
  CLUS_3                        20                         144
  CLUS_4                        22                          72
  CLUS_5                        10                          79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q12) MUTATED       41     43     15      9     10
  AMP PEAK 10(6Q12) WILD-TYPE     82    112    106     38     63
D10V9, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        41                          82
  CLUS_2                        43                         112
  CLUS_3                        15                         106
  CLUS_4                         9                          38
  CLUS_5                        10                          63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 10(6Q12) MUTATED       22     38     18     18     22
  AMP PEAK 10(6Q12) WILD-TYPE     29     86    126     90     70
D10V10, multiclass
        clus
vv       AMP PEAK 10(6Q12) MUTATED AMP PEAK 10(6Q12) WILD-TYPE
  CLUS_1                        22                          29
  CLUS_2                        38                          86
  CLUS_3                        18                         126
  CLUS_4                        18                          90
  CLUS_5                        22                          70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = AMP PEAK 11(6Q21) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED       59     25     21      6
  AMP PEAK 11(6Q21) WILD-TYPE     92     73    161    188
D11V1, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        59                          92
  CLUS_2                        25                          73
  CLUS_3                        21                         161
  CLUS_4                         6                         188
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       43     39     16
  AMP PEAK 11(6Q21) WILD-TYPE    198    122    159
D11V2, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        43                         198
  CLUS_2                        39                         122
  CLUS_3                        16                         159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 11(6Q21) MUTATED       19     30     21     17
  AMP PEAK 11(6Q21) WILD-TYPE    126    107    115     47
D11V3, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        19                         126
  CLUS_2                        30                         107
  CLUS_3                        21                         115
  CLUS_4                        17                          47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       47     24     16
  AMP PEAK 11(6Q21) WILD-TYPE    226     86     83
D11V4, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        47                         226
  CLUS_2                        24                          86
  CLUS_3                        16                          83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       26     59     22
  AMP PEAK 11(6Q21) WILD-TYPE    144    214    131
D11V5, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        26                         144
  CLUS_2                        59                         214
  CLUS_3                        22                         131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED       43     19     19     16     10
  AMP PEAK 11(6Q21) WILD-TYPE     88     97     79    105    120
D11V6, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        43                          88
  CLUS_2                        19                          97
  CLUS_3                        19                          79
  CLUS_4                        16                         105
  CLUS_5                        10                         120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 11(6Q21) MUTATED       34     52     24
  AMP PEAK 11(6Q21) WILD-TYPE    133    226    148
D11V7, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        34                         133
  CLUS_2                        52                         226
  CLUS_3                        24                         148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED       45     30     19      9      7
  AMP PEAK 11(6Q21) WILD-TYPE     82    113    145     85     82
D11V8, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        45                          82
  CLUS_2                        30                         113
  CLUS_3                        19                         145
  CLUS_4                         9                          85
  CLUS_5                         7                          82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED       28     29     15      9      9
  AMP PEAK 11(6Q21) WILD-TYPE     95    126    106     38     64
D11V9, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        28                          95
  CLUS_2                        29                         126
  CLUS_3                        15                         106
  CLUS_4                         9                          38
  CLUS_5                         9                          64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 11(6Q21) MUTATED       17     32     16     16      9
  AMP PEAK 11(6Q21) WILD-TYPE     34     92    128     92     83
D11V10, multiclass
        clus
vv       AMP PEAK 11(6Q21) MUTATED AMP PEAK 11(6Q21) WILD-TYPE
  CLUS_1                        17                          34
  CLUS_2                        32                          92
  CLUS_3                        16                         128
  CLUS_4                        16                          92
  CLUS_5                         9                          83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = AMP PEAK 12(7P22.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7P22.3) MUTATED      113     54    135     51
  AMP PEAK 12(7P22.3) WILD-TYPE     38     44     47    143
D12V1, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                         113                            38
  CLUS_2                          54                            44
  CLUS_3                         135                            47
  CLUS_4                          51                           143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P22.3) MUTATED      153    108     66
  AMP PEAK 12(7P22.3) WILD-TYPE     88     53    109
D12V2, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                         153                            88
  CLUS_2                         108                            53
  CLUS_3                          66                           109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 12(7P22.3) MUTATED       82     76     76     36
  AMP PEAK 12(7P22.3) WILD-TYPE     63     61     60     28
D12V3, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                          82                            63
  CLUS_2                          76                            61
  CLUS_3                          76                            60
  CLUS_4                          36                            28
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P22.3) MUTATED      162     60     48
  AMP PEAK 12(7P22.3) WILD-TYPE    111     50     51
D12V4, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                         162                           111
  CLUS_2                          60                            50
  CLUS_3                          48                            51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P22.3) MUTATED      104    172     62
  AMP PEAK 12(7P22.3) WILD-TYPE     66    101     91
D12V5, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                         104                            66
  CLUS_2                         172                           101
  CLUS_3                          62                            91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7P22.3) MUTATED       93     60     57     76     52
  AMP PEAK 12(7P22.3) WILD-TYPE     38     56     41     45     78
D12V6, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                          93                            38
  CLUS_2                          60                            56
  CLUS_3                          57                            41
  CLUS_4                          76                            45
  CLUS_5                          52                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 12(7P22.3) MUTATED      111    163     74
  AMP PEAK 12(7P22.3) WILD-TYPE     56    115     98
D12V7, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                         111                            56
  CLUS_2                         163                           115
  CLUS_3                          74                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7P22.3) MUTATED       88     92     76     61     31
  AMP PEAK 12(7P22.3) WILD-TYPE     39     51     88     33     58
D12V8, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                          88                            39
  CLUS_2                          92                            51
  CLUS_3                          76                            88
  CLUS_4                          61                            33
  CLUS_5                          31                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7P22.3) MUTATED       86     94     51     28     37
  AMP PEAK 12(7P22.3) WILD-TYPE     37     61     70     19     36
D12V9, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                          86                            37
  CLUS_2                          94                            61
  CLUS_3                          51                            70
  CLUS_4                          28                            19
  CLUS_5                          37                            36
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 12(7P22.3) MUTATED       38     81     72     45     60
  AMP PEAK 12(7P22.3) WILD-TYPE     13     43     72     63     32
D12V10, multiclass
        clus
vv       AMP PEAK 12(7P22.3) MUTATED AMP PEAK 12(7P22.3) WILD-TYPE
  CLUS_1                          38                            13
  CLUS_2                          81                            43
  CLUS_3                          72                            72
  CLUS_4                          45                            63
  CLUS_5                          60                            32
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = AMP PEAK 13(7P11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P11.2) MUTATED       98     51    139     51
  AMP PEAK 13(7P11.2) WILD-TYPE     53     47     43    143
D13V1, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          98                            53
  CLUS_2                          51                            47
  CLUS_3                         139                            43
  CLUS_4                          51                           143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED      147    105     64
  AMP PEAK 13(7P11.2) WILD-TYPE     94     56    111
D13V2, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                         147                            94
  CLUS_2                         105                            56
  CLUS_3                          64                           111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 13(7P11.2) MUTATED       81     72     72     31
  AMP PEAK 13(7P11.2) WILD-TYPE     64     65     64     33
D13V3, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          81                            64
  CLUS_2                          72                            65
  CLUS_3                          72                            64
  CLUS_4                          31                            33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED      155     55     46
  AMP PEAK 13(7P11.2) WILD-TYPE    118     55     53
D13V4, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                         155                           118
  CLUS_2                          55                            55
  CLUS_3                          46                            53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED      102    163     61
  AMP PEAK 13(7P11.2) WILD-TYPE     68    110     92
D13V5, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                         102                            68
  CLUS_2                         163                           110
  CLUS_3                          61                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P11.2) MUTATED       85     59     53     78     51
  AMP PEAK 13(7P11.2) WILD-TYPE     46     57     45     43     79
D13V6, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          85                            46
  CLUS_2                          59                            57
  CLUS_3                          53                            45
  CLUS_4                          78                            43
  CLUS_5                          51                            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 13(7P11.2) MUTATED      105    157     71
  AMP PEAK 13(7P11.2) WILD-TYPE     62    121    101
D13V7, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                         105                            62
  CLUS_2                         157                           121
  CLUS_3                          71                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P11.2) MUTATED       78     92     74     59     30
  AMP PEAK 13(7P11.2) WILD-TYPE     49     51     90     35     59
D13V8, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          78                            49
  CLUS_2                          92                            51
  CLUS_3                          74                            90
  CLUS_4                          59                            35
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P11.2) MUTATED       82     91     49     27     32
  AMP PEAK 13(7P11.2) WILD-TYPE     41     64     72     20     41
D13V9, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          82                            41
  CLUS_2                          91                            64
  CLUS_3                          49                            72
  CLUS_4                          27                            20
  CLUS_5                          32                            41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 13(7P11.2) MUTATED       35     78     68     42     58
  AMP PEAK 13(7P11.2) WILD-TYPE     16     46     76     66     34
D13V10, multiclass
        clus
vv       AMP PEAK 13(7P11.2) MUTATED AMP PEAK 13(7P11.2) WILD-TYPE
  CLUS_1                          35                            16
  CLUS_2                          78                            46
  CLUS_3                          68                            76
  CLUS_4                          42                            66
  CLUS_5                          58                            34
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = AMP PEAK 14(7Q21.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q21.2) MUTATED       91     39    137     50
  AMP PEAK 14(7Q21.2) WILD-TYPE     60     59     45    144
D14V1, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          91                            60
  CLUS_2                          39                            59
  CLUS_3                         137                            45
  CLUS_4                          50                           144
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q21.2) MUTATED      131     98     63
  AMP PEAK 14(7Q21.2) WILD-TYPE    110     63    112
D14V2, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                         131                           110
  CLUS_2                          98                            63
  CLUS_3                          63                           112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 14(7Q21.2) MUTATED       81     73     63     28
  AMP PEAK 14(7Q21.2) WILD-TYPE     64     64     73     36
D14V3, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          81                            64
  CLUS_2                          73                            64
  CLUS_3                          63                            73
  CLUS_4                          28                            36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q21.2) MUTATED      144     59     42
  AMP PEAK 14(7Q21.2) WILD-TYPE    129     51     57
D14V4, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                         144                           129
  CLUS_2                          59                            51
  CLUS_3                          42                            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q21.2) MUTATED       98    146     61
  AMP PEAK 14(7Q21.2) WILD-TYPE     72    127     92
D14V5, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          98                            72
  CLUS_2                         146                           127
  CLUS_3                          61                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7Q21.2) MUTATED       74     54     55     70     52
  AMP PEAK 14(7Q21.2) WILD-TYPE     57     62     43     51     78
D14V6, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          74                            57
  CLUS_2                          54                            62
  CLUS_3                          55                            43
  CLUS_4                          70                            51
  CLUS_5                          52                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 14(7Q21.2) MUTATED       94    147     71
  AMP PEAK 14(7Q21.2) WILD-TYPE     73    131    101
D14V7, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          94                            73
  CLUS_2                         147                           131
  CLUS_3                          71                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7Q21.2) MUTATED       69     78     77     58     30
  AMP PEAK 14(7Q21.2) WILD-TYPE     58     65     87     36     59
D14V8, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          69                            58
  CLUS_2                          78                            65
  CLUS_3                          77                            87
  CLUS_4                          58                            36
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7Q21.2) MUTATED       75     81     46     26     34
  AMP PEAK 14(7Q21.2) WILD-TYPE     48     74     75     21     39
D14V9, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          75                            48
  CLUS_2                          81                            74
  CLUS_3                          46                            75
  CLUS_4                          26                            21
  CLUS_5                          34                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 14(7Q21.2) MUTATED       28     69     67     41     57
  AMP PEAK 14(7Q21.2) WILD-TYPE     23     55     77     67     35
D14V10, multiclass
        clus
vv       AMP PEAK 14(7Q21.2) MUTATED AMP PEAK 14(7Q21.2) WILD-TYPE
  CLUS_1                          28                            23
  CLUS_2                          69                            55
  CLUS_3                          67                            77
  CLUS_4                          41                            67
  CLUS_5                          57                            35
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = AMP PEAK 15(8P23.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P23.1) MUTATED       44     48     37    100
  AMP PEAK 15(8P23.1) WILD-TYPE    107     50    145     94
D15V1, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          44                           107
  CLUS_2                          48                            50
  CLUS_3                          37                           145
  CLUS_4                         100                            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P23.1) MUTATED      116     37     53
  AMP PEAK 15(8P23.1) WILD-TYPE    125    124    122
D15V2, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                         116                           125
  CLUS_2                          37                           124
  CLUS_3                          53                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 15(8P23.1) MUTATED       57     50     47     22
  AMP PEAK 15(8P23.1) WILD-TYPE     88     87     89     42
D15V3, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          57                            88
  CLUS_2                          50                            87
  CLUS_3                          47                            89
  CLUS_4                          22                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P23.1) MUTATED       97     44     35
  AMP PEAK 15(8P23.1) WILD-TYPE    176     66     64
D15V4, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          97                           176
  CLUS_2                          44                            66
  CLUS_3                          35                            64
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P23.1) MUTATED       34    124     61
  AMP PEAK 15(8P23.1) WILD-TYPE    136    149     92
D15V5, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          34                           136
  CLUS_2                         124                           149
  CLUS_3                          61                            92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P23.1) MUTATED       37     60     44     20     58
  AMP PEAK 15(8P23.1) WILD-TYPE     94     56     54    101     72
D15V6, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          37                            94
  CLUS_2                          60                            56
  CLUS_3                          44                            54
  CLUS_4                          20                           101
  CLUS_5                          58                            72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 15(8P23.1) MUTATED       41    125     58
  AMP PEAK 15(8P23.1) WILD-TYPE    126    153    114
D15V7, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          41                           126
  CLUS_2                         125                           153
  CLUS_3                          58                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P23.1) MUTATED       43     64     65     18     34
  AMP PEAK 15(8P23.1) WILD-TYPE     84     79     99     76     55
D15V8, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          43                            84
  CLUS_2                          64                            79
  CLUS_3                          65                            99
  CLUS_4                          18                            76
  CLUS_5                          34                            55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P23.1) MUTATED       26     69     40     18     28
  AMP PEAK 15(8P23.1) WILD-TYPE     97     86     81     29     45
D15V9, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          26                            97
  CLUS_2                          69                            86
  CLUS_3                          40                            81
  CLUS_4                          18                            29
  CLUS_5                          28                            45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 15(8P23.1) MUTATED       12     53     57     43     16
  AMP PEAK 15(8P23.1) WILD-TYPE     39     71     87     65     76
D15V10, multiclass
        clus
vv       AMP PEAK 15(8P23.1) MUTATED AMP PEAK 15(8P23.1) WILD-TYPE
  CLUS_1                          12                            39
  CLUS_2                          53                            71
  CLUS_3                          57                            87
  CLUS_4                          43                            65
  CLUS_5                          16                            76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = AMP PEAK 16(8P11.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8P11.21) MUTATED       50     50     74     98
  AMP PEAK 16(8P11.21) WILD-TYPE    101     48    108     96
D16V1, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           50                            101
  CLUS_2                           50                             48
  CLUS_3                           74                            108
  CLUS_4                           98                             96
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED      119     68     61
  AMP PEAK 16(8P11.21) WILD-TYPE    122     93    114
D16V2, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                          119                            122
  CLUS_2                           68                             93
  CLUS_3                           61                            114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 16(8P11.21) MUTATED       67     56     64     26
  AMP PEAK 16(8P11.21) WILD-TYPE     78     81     72     38
D16V3, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           67                             78
  CLUS_2                           56                             81
  CLUS_3                           64                             72
  CLUS_4                           26                             38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED      118     47     48
  AMP PEAK 16(8P11.21) WILD-TYPE    155     63     51
D16V4, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                          118                            155
  CLUS_2                           47                             63
  CLUS_3                           48                             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED       67    131     62
  AMP PEAK 16(8P11.21) WILD-TYPE    103    142     91
D16V5, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           67                            103
  CLUS_2                          131                            142
  CLUS_3                           62                             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       47     55     53     50     55
  AMP PEAK 16(8P11.21) WILD-TYPE     84     61     45     71     75
D16V6, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           47                             84
  CLUS_2                           55                             61
  CLUS_3                           53                             45
  CLUS_4                           50                             71
  CLUS_5                           55                             75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 16(8P11.21) MUTATED       69    136     63
  AMP PEAK 16(8P11.21) WILD-TYPE     98    142    109
D16V7, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           69                             98
  CLUS_2                          136                            142
  CLUS_3                           63                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       51     73     69     42     33
  AMP PEAK 16(8P11.21) WILD-TYPE     76     70     95     52     56
D16V8, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           51                             76
  CLUS_2                           73                             70
  CLUS_3                           69                             95
  CLUS_4                           42                             52
  CLUS_5                           33                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       52     71     46     20     31
  AMP PEAK 16(8P11.21) WILD-TYPE     71     84     75     27     42
D16V9, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           52                             71
  CLUS_2                           71                             84
  CLUS_3                           46                             75
  CLUS_4                           20                             27
  CLUS_5                           31                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 16(8P11.21) MUTATED       16     61     62     42     39
  AMP PEAK 16(8P11.21) WILD-TYPE     35     63     82     66     53
D16V10, multiclass
        clus
vv       AMP PEAK 16(8P11.21) MUTATED AMP PEAK 16(8P11.21) WILD-TYPE
  CLUS_1                           16                             35
  CLUS_2                           61                             63
  CLUS_3                           62                             82
  CLUS_4                           42                             66
  CLUS_5                           39                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = AMP PEAK 17(8Q24.21) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(8Q24.21) MUTATED      124     65    147    118
  AMP PEAK 17(8Q24.21) WILD-TYPE     27     33     35     76
D17V1, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          124                             27
  CLUS_2                           65                             33
  CLUS_3                          147                             35
  CLUS_4                          118                             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q24.21) MUTATED      183    134    100
  AMP PEAK 17(8Q24.21) WILD-TYPE     58     27     75
D17V2, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          183                             58
  CLUS_2                          134                             27
  CLUS_3                          100                             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 17(8Q24.21) MUTATED      110    100     90     45
  AMP PEAK 17(8Q24.21) WILD-TYPE     35     37     46     19
D17V3, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          110                             35
  CLUS_2                          100                             37
  CLUS_3                           90                             46
  CLUS_4                           45                             19
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q24.21) MUTATED      202     80     63
  AMP PEAK 17(8Q24.21) WILD-TYPE     71     30     36
D17V4, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          202                             71
  CLUS_2                           80                             30
  CLUS_3                           63                             36
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q24.21) MUTATED      133    207     94
  AMP PEAK 17(8Q24.21) WILD-TYPE     37     66     59
D17V5, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          133                             37
  CLUS_2                          207                             66
  CLUS_3                           94                             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q24.21) MUTATED      111     84     73     94     72
  AMP PEAK 17(8Q24.21) WILD-TYPE     20     32     25     27     58
D17V6, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          111                             20
  CLUS_2                           84                             32
  CLUS_3                           73                             25
  CLUS_4                           94                             27
  CLUS_5                           72                             58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 17(8Q24.21) MUTATED      142    209     98
  AMP PEAK 17(8Q24.21) WILD-TYPE     25     69     74
D17V7, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          142                             25
  CLUS_2                          209                             69
  CLUS_3                           98                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q24.21) MUTATED      105    123     92     77     52
  AMP PEAK 17(8Q24.21) WILD-TYPE     22     20     72     17     37
D17V8, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          105                             22
  CLUS_2                          123                             20
  CLUS_3                           92                             72
  CLUS_4                           77                             17
  CLUS_5                           52                             37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q24.21) MUTATED      107    116     71     33     50
  AMP PEAK 17(8Q24.21) WILD-TYPE     16     39     50     14     23
D17V9, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                          107                             16
  CLUS_2                          116                             39
  CLUS_3                           71                             50
  CLUS_4                           33                             14
  CLUS_5                           50                             23
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 17(8Q24.21) MUTATED       43    101     91     68     74
  AMP PEAK 17(8Q24.21) WILD-TYPE      8     23     53     40     18
D17V10, multiclass
        clus
vv       AMP PEAK 17(8Q24.21) MUTATED AMP PEAK 17(8Q24.21) WILD-TYPE
  CLUS_1                           43                              8
  CLUS_2                          101                             23
  CLUS_3                           91                             53
  CLUS_4                           68                             40
  CLUS_5                           74                             18
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = AMP PEAK 18(9P24.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(9P24.1) MUTATED       30     11     24     26
  AMP PEAK 18(9P24.1) WILD-TYPE    121     87    158    168
D18V1, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          30                           121
  CLUS_2                          11                            87
  CLUS_3                          24                           158
  CLUS_4                          26                           168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(9P24.1) MUTATED       35     27     22
  AMP PEAK 18(9P24.1) WILD-TYPE    206    134    153
D18V2, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          35                           206
  CLUS_2                          27                           134
  CLUS_3                          22                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 18(9P24.1) MUTATED       23     21     21      8
  AMP PEAK 18(9P24.1) WILD-TYPE    122    116    115     56
D18V3, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          23                           122
  CLUS_2                          21                           116
  CLUS_3                          21                           115
  CLUS_4                           8                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(9P24.1) MUTATED       41     17     15
  AMP PEAK 18(9P24.1) WILD-TYPE    232     93     84
D18V4, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          41                           232
  CLUS_2                          17                            93
  CLUS_3                          15                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(9P24.1) MUTATED       32     39     18
  AMP PEAK 18(9P24.1) WILD-TYPE    138    234    135
D18V5, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          32                           138
  CLUS_2                          39                           234
  CLUS_3                          18                           135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(9P24.1) MUTATED       27     16     12     18     16
  AMP PEAK 18(9P24.1) WILD-TYPE    104    100     86    103    114
D18V6, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          27                           104
  CLUS_2                          16                           100
  CLUS_3                          12                            86
  CLUS_4                          18                           103
  CLUS_5                          16                           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 18(9P24.1) MUTATED       34     36     19
  AMP PEAK 18(9P24.1) WILD-TYPE    133    242    153
D18V7, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          34                           133
  CLUS_2                          36                           242
  CLUS_3                          19                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(9P24.1) MUTATED       22     19     24     15      9
  AMP PEAK 18(9P24.1) WILD-TYPE    105    124    140     79     80
D18V8, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          22                           105
  CLUS_2                          19                           124
  CLUS_3                          24                           140
  CLUS_4                          15                            79
  CLUS_5                           9                            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(9P24.1) MUTATED       27     19     11      3     11
  AMP PEAK 18(9P24.1) WILD-TYPE     96    136    110     44     62
D18V9, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          27                            96
  CLUS_2                          19                           136
  CLUS_3                          11                           110
  CLUS_4                           3                            44
  CLUS_5                          11                            62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 18(9P24.1) MUTATED       12     16     18     10     15
  AMP PEAK 18(9P24.1) WILD-TYPE     39    108    126     98     77
D18V10, multiclass
        clus
vv       AMP PEAK 18(9P24.1) MUTATED AMP PEAK 18(9P24.1) WILD-TYPE
  CLUS_1                          12                            39
  CLUS_2                          16                           108
  CLUS_3                          18                           126
  CLUS_4                          10                            98
  CLUS_5                          15                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = AMP PEAK 19(9P13.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(9P13.3) MUTATED       46     29     33     24
  AMP PEAK 19(9P13.3) WILD-TYPE    105     69    149    170
D19V1, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          46                           105
  CLUS_2                          29                            69
  CLUS_3                          33                           149
  CLUS_4                          24                           170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P13.3) MUTATED       59     37     28
  AMP PEAK 19(9P13.3) WILD-TYPE    182    124    147
D19V2, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          59                           182
  CLUS_2                          37                           124
  CLUS_3                          28                           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 19(9P13.3) MUTATED       35     27     24     19
  AMP PEAK 19(9P13.3) WILD-TYPE    110    110    112     45
D19V3, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          35                           110
  CLUS_2                          27                           110
  CLUS_3                          24                           112
  CLUS_4                          19                            45
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P13.3) MUTATED       66     22     17
  AMP PEAK 19(9P13.3) WILD-TYPE    207     88     82
D19V4, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          66                           207
  CLUS_2                          22                            88
  CLUS_3                          17                            82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P13.3) MUTATED       39     67     21
  AMP PEAK 19(9P13.3) WILD-TYPE    131    206    132
D19V5, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          39                           131
  CLUS_2                          67                           206
  CLUS_3                          21                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P13.3) MUTATED       36     28     23     24     16
  AMP PEAK 19(9P13.3) WILD-TYPE     95     88     75     97    114
D19V6, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          36                            95
  CLUS_2                          28                            88
  CLUS_3                          23                            75
  CLUS_4                          24                            97
  CLUS_5                          16                           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 19(9P13.3) MUTATED       42     60     28
  AMP PEAK 19(9P13.3) WILD-TYPE    125    218    144
D19V7, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          42                           125
  CLUS_2                          60                           218
  CLUS_3                          28                           144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P13.3) MUTATED       34     32     31     19     14
  AMP PEAK 19(9P13.3) WILD-TYPE     93    111    133     75     75
D19V8, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          34                            93
  CLUS_2                          32                           111
  CLUS_3                          31                           133
  CLUS_4                          19                            75
  CLUS_5                          14                            75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P13.3) MUTATED       35     40     18      6     13
  AMP PEAK 19(9P13.3) WILD-TYPE     88    115    103     41     60
D19V9, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          35                            88
  CLUS_2                          40                           115
  CLUS_3                          18                           103
  CLUS_4                           6                            41
  CLUS_5                          13                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 19(9P13.3) MUTATED       16     36     23     18     19
  AMP PEAK 19(9P13.3) WILD-TYPE     35     88    121     90     73
D19V10, multiclass
        clus
vv       AMP PEAK 19(9P13.3) MUTATED AMP PEAK 19(9P13.3) WILD-TYPE
  CLUS_1                          16                            35
  CLUS_2                          36                            88
  CLUS_3                          23                           121
  CLUS_4                          18                            90
  CLUS_5                          19                            73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = AMP PEAK 20(9Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(9Q34.3) MUTATED       58     21     75     31
  AMP PEAK 20(9Q34.3) WILD-TYPE     93     77    107    163
D20V1, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          58                            93
  CLUS_2                          21                            77
  CLUS_3                          75                           107
  CLUS_4                          31                           163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(9Q34.3) MUTATED       70     61     39
  AMP PEAK 20(9Q34.3) WILD-TYPE    171    100    136
D20V2, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          70                           171
  CLUS_2                          61                           100
  CLUS_3                          39                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 20(9Q34.3) MUTATED       44     40     39     23
  AMP PEAK 20(9Q34.3) WILD-TYPE    101     97     97     41
D20V3, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          40                            97
  CLUS_3                          39                            97
  CLUS_4                          23                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(9Q34.3) MUTATED       86     35     25
  AMP PEAK 20(9Q34.3) WILD-TYPE    187     75     74
D20V4, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          86                           187
  CLUS_2                          35                            75
  CLUS_3                          25                            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(9Q34.3) MUTATED       60     84     33
  AMP PEAK 20(9Q34.3) WILD-TYPE    110    189    120
D20V5, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          60                           110
  CLUS_2                          84                           189
  CLUS_3                          33                           120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(9Q34.3) MUTATED       52     32     26     43     24
  AMP PEAK 20(9Q34.3) WILD-TYPE     79     84     72     78    106
D20V6, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          52                            79
  CLUS_2                          32                            84
  CLUS_3                          26                            72
  CLUS_4                          43                            78
  CLUS_5                          24                           106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 20(9Q34.3) MUTATED       61     83     38
  AMP PEAK 20(9Q34.3) WILD-TYPE    106    195    134
D20V7, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          61                           106
  CLUS_2                          83                           195
  CLUS_3                          38                           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(9Q34.3) MUTATED       40     50     39     33     20
  AMP PEAK 20(9Q34.3) WILD-TYPE     87     93    125     61     69
D20V8, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          40                            87
  CLUS_2                          50                            93
  CLUS_3                          39                           125
  CLUS_4                          33                            61
  CLUS_5                          20                            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(9Q34.3) MUTATED       47     48     25     15     13
  AMP PEAK 20(9Q34.3) WILD-TYPE     76    107     96     32     60
D20V9, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          47                            76
  CLUS_2                          48                           107
  CLUS_3                          25                            96
  CLUS_4                          15                            32
  CLUS_5                          13                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 20(9Q34.3) MUTATED       16     39     33     27     33
  AMP PEAK 20(9Q34.3) WILD-TYPE     35     85    111     81     59
D20V10, multiclass
        clus
vv       AMP PEAK 20(9Q34.3) MUTATED AMP PEAK 20(9Q34.3) WILD-TYPE
  CLUS_1                          16                            35
  CLUS_2                          39                            85
  CLUS_3                          33                           111
  CLUS_4                          27                            81
  CLUS_5                          33                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = AMP PEAK 21(10P11.22) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(10P11.22) MUTATED       68     44     45     12
  AMP PEAK 21(10P11.22) WILD-TYPE     83     54    137    182
D21V1, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            68                              83
  CLUS_2                            44                              54
  CLUS_3                            45                             137
  CLUS_4                            12                             182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(10P11.22) MUTATED       75     54     28
  AMP PEAK 21(10P11.22) WILD-TYPE    166    107    147
D21V2, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            75                             166
  CLUS_2                            54                             107
  CLUS_3                            28                             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 21(10P11.22) MUTATED       38     35     36     17
  AMP PEAK 21(10P11.22) WILD-TYPE    107    102    100     47
D21V3, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            38                             107
  CLUS_2                            35                             102
  CLUS_3                            36                             100
  CLUS_4                            17                              47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(10P11.22) MUTATED       74     25     27
  AMP PEAK 21(10P11.22) WILD-TYPE    199     85     72
D21V4, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            74                             199
  CLUS_2                            25                              85
  CLUS_3                            27                              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(10P11.22) MUTATED       45     88     31
  AMP PEAK 21(10P11.22) WILD-TYPE    125    185    122
D21V5, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            45                             125
  CLUS_2                            88                             185
  CLUS_3                            31                             122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(10P11.22) MUTATED       50     36     28     28     22
  AMP PEAK 21(10P11.22) WILD-TYPE     81     80     70     93    108
D21V6, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            50                              81
  CLUS_2                            36                              80
  CLUS_3                            28                              70
  CLUS_4                            28                              93
  CLUS_5                            22                             108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 21(10P11.22) MUTATED       49     74     43
  AMP PEAK 21(10P11.22) WILD-TYPE    118    204    129
D21V7, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            49                             118
  CLUS_2                            74                             204
  CLUS_3                            43                             129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(10P11.22) MUTATED       57     42     28     21     18
  AMP PEAK 21(10P11.22) WILD-TYPE     70    101    136     73     71
D21V8, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            57                              70
  CLUS_2                            42                             101
  CLUS_3                            28                             136
  CLUS_4                            21                              73
  CLUS_5                            18                              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(10P11.22) MUTATED       37     56     30      9     10
  AMP PEAK 21(10P11.22) WILD-TYPE     86     99     91     38     63
D21V9, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            37                              86
  CLUS_2                            56                              99
  CLUS_3                            30                              91
  CLUS_4                             9                              38
  CLUS_5                            10                              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 21(10P11.22) MUTATED       16     48     29     27     22
  AMP PEAK 21(10P11.22) WILD-TYPE     35     76    115     81     70
D21V10, multiclass
        clus
vv       AMP PEAK 21(10P11.22) MUTATED AMP PEAK 21(10P11.22) WILD-TYPE
  CLUS_1                            16                              35
  CLUS_2                            48                              76
  CLUS_3                            29                             115
  CLUS_4                            27                              81
  CLUS_5                            22                              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = AMP PEAK 22(10Q22.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(10Q22.2) MUTATED       38     46     28     13
  AMP PEAK 22(10Q22.2) WILD-TYPE    113     52    154    181
D22V1, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           38                            113
  CLUS_2                           46                             52
  CLUS_3                           28                            154
  CLUS_4                           13                            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(10Q22.2) MUTATED       58     35     23
  AMP PEAK 22(10Q22.2) WILD-TYPE    183    126    152
D22V2, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           58                            183
  CLUS_2                           35                            126
  CLUS_3                           23                            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 22(10Q22.2) MUTATED       28     27     32     12
  AMP PEAK 22(10Q22.2) WILD-TYPE    117    110    104     52
D22V3, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           28                            117
  CLUS_2                           27                            110
  CLUS_3                           32                            104
  CLUS_4                           12                             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(10Q22.2) MUTATED       59     17     23
  AMP PEAK 22(10Q22.2) WILD-TYPE    214     93     76
D22V4, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           59                            214
  CLUS_2                           17                             93
  CLUS_3                           23                             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(10Q22.2) MUTATED       37     57     26
  AMP PEAK 22(10Q22.2) WILD-TYPE    133    216    127
D22V5, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           37                            133
  CLUS_2                           57                            216
  CLUS_3                           26                            127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(10Q22.2) MUTATED       36     35     10     17     22
  AMP PEAK 22(10Q22.2) WILD-TYPE     95     81     88    104    108
D22V6, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           36                             95
  CLUS_2                           35                             81
  CLUS_3                           10                             88
  CLUS_4                           17                            104
  CLUS_5                           22                            108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 22(10Q22.2) MUTATED       33     58     30
  AMP PEAK 22(10Q22.2) WILD-TYPE    134    220    142
D22V7, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           33                            134
  CLUS_2                           58                            220
  CLUS_3                           30                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(10Q22.2) MUTATED       33     32     29     14     13
  AMP PEAK 22(10Q22.2) WILD-TYPE     94    111    135     80     76
D22V8, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           33                             94
  CLUS_2                           32                            111
  CLUS_3                           29                            135
  CLUS_4                           14                             80
  CLUS_5                           13                             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(10Q22.2) MUTATED       21     49     17      8      9
  AMP PEAK 22(10Q22.2) WILD-TYPE    102    106    104     39     64
D22V9, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           21                            102
  CLUS_2                           49                            106
  CLUS_3                           17                            104
  CLUS_4                            8                             39
  CLUS_5                            9                             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 22(10Q22.2) MUTATED       10     32     27     22     13
  AMP PEAK 22(10Q22.2) WILD-TYPE     41     92    117     86     79
D22V10, multiclass
        clus
vv       AMP PEAK 22(10Q22.2) MUTATED AMP PEAK 22(10Q22.2) WILD-TYPE
  CLUS_1                           10                             41
  CLUS_2                           32                             92
  CLUS_3                           27                            117
  CLUS_4                           22                             86
  CLUS_5                           13                             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = AMP PEAK 23(10Q26.13) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(10Q26.13) MUTATED       42     35     24     18
  AMP PEAK 23(10Q26.13) WILD-TYPE    109     63    158    176
D23V1, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            42                             109
  CLUS_2                            35                              63
  CLUS_3                            24                             158
  CLUS_4                            18                             176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(10Q26.13) MUTATED       47     31     28
  AMP PEAK 23(10Q26.13) WILD-TYPE    194    130    147
D23V2, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            47                             194
  CLUS_2                            31                             130
  CLUS_3                            28                             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 23(10Q26.13) MUTATED       22     28     31     12
  AMP PEAK 23(10Q26.13) WILD-TYPE    123    109    105     52
D23V3, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            22                             123
  CLUS_2                            28                             109
  CLUS_3                            31                             105
  CLUS_4                            12                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(10Q26.13) MUTATED       48     20     25
  AMP PEAK 23(10Q26.13) WILD-TYPE    225     90     74
D23V4, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            48                             225
  CLUS_2                            20                              90
  CLUS_3                            25                              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(10Q26.13) MUTATED       31     52     29
  AMP PEAK 23(10Q26.13) WILD-TYPE    139    221    124
D23V5, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            31                             139
  CLUS_2                            52                             221
  CLUS_3                            29                             124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(10Q26.13) MUTATED       38     27     11     14     22
  AMP PEAK 23(10Q26.13) WILD-TYPE     93     89     87    107    108
D23V6, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            38                              93
  CLUS_2                            27                              89
  CLUS_3                            11                              87
  CLUS_4                            14                             107
  CLUS_5                            22                             108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 23(10Q26.13) MUTATED       24     56     37
  AMP PEAK 23(10Q26.13) WILD-TYPE    143    222    135
D23V7, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            24                             143
  CLUS_2                            56                             222
  CLUS_3                            37                             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(10Q26.13) MUTATED       37     30     26      7     17
  AMP PEAK 23(10Q26.13) WILD-TYPE     90    113    138     87     72
D23V8, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            37                              90
  CLUS_2                            30                             113
  CLUS_3                            26                             138
  CLUS_4                             7                              87
  CLUS_5                            17                              72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(10Q26.13) MUTATED       17     42     23      5     12
  AMP PEAK 23(10Q26.13) WILD-TYPE    106    113     98     42     61
D23V9, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            17                             106
  CLUS_2                            42                             113
  CLUS_3                            23                              98
  CLUS_4                             5                              42
  CLUS_5                            12                              61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 23(10Q26.13) MUTATED       11     32     25     25      6
  AMP PEAK 23(10Q26.13) WILD-TYPE     40     92    119     83     86
D23V10, multiclass
        clus
vv       AMP PEAK 23(10Q26.13) MUTATED AMP PEAK 23(10Q26.13) WILD-TYPE
  CLUS_1                            11                              40
  CLUS_2                            32                              92
  CLUS_3                            25                             119
  CLUS_4                            25                              83
  CLUS_5                             6                              86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = AMP PEAK 24(11P13) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(11P13) MUTATED       49     29     47     13
  AMP PEAK 24(11P13) WILD-TYPE    102     69    135    181
D24V1, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         49                          102
  CLUS_2                         29                           69
  CLUS_3                         47                          135
  CLUS_4                         13                          181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(11P13) MUTATED       47     52     30
  AMP PEAK 24(11P13) WILD-TYPE    194    109    145
D24V2, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         47                          194
  CLUS_2                         52                          109
  CLUS_3                         30                          145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 24(11P13) MUTATED       29     28     38     11
  AMP PEAK 24(11P13) WILD-TYPE    116    109     98     53
D24V3, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         29                          116
  CLUS_2                         28                          109
  CLUS_3                         38                           98
  CLUS_4                         11                           53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(11P13) MUTATED       61     23     22
  AMP PEAK 24(11P13) WILD-TYPE    212     87     77
D24V4, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         61                          212
  CLUS_2                         23                           87
  CLUS_3                         22                           77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(11P13) MUTATED       44     59     31
  AMP PEAK 24(11P13) WILD-TYPE    126    214    122
D24V5, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         44                          126
  CLUS_2                         59                          214
  CLUS_3                         31                          122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(11P13) MUTATED       38     21     15     34     26
  AMP PEAK 24(11P13) WILD-TYPE     93     95     83     87    104
D24V6, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         38                           93
  CLUS_2                         21                           95
  CLUS_3                         15                           83
  CLUS_4                         34                           87
  CLUS_5                         26                          104
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 24(11P13) MUTATED       41     58     36
  AMP PEAK 24(11P13) WILD-TYPE    126    220    136
D24V7, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         41                          126
  CLUS_2                         58                          220
  CLUS_3                         36                          136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(11P13) MUTATED       42     28     25     27     13
  AMP PEAK 24(11P13) WILD-TYPE     85    115    139     67     76
D24V8, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         42                           85
  CLUS_2                         28                          115
  CLUS_3                         25                          139
  CLUS_4                         27                           67
  CLUS_5                         13                           76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(11P13) MUTATED       34     41     22     10      9
  AMP PEAK 24(11P13) WILD-TYPE     89    114     99     37     64
D24V9, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         34                           89
  CLUS_2                         41                          114
  CLUS_3                         22                           99
  CLUS_4                         10                           37
  CLUS_5                          9                           64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 24(11P13) MUTATED       18     28     23     20     27
  AMP PEAK 24(11P13) WILD-TYPE     33     96    121     88     65
D24V10, multiclass
        clus
vv       AMP PEAK 24(11P13) MUTATED AMP PEAK 24(11P13) WILD-TYPE
  CLUS_1                         18                           33
  CLUS_2                         28                           96
  CLUS_3                         23                          121
  CLUS_4                         20                           88
  CLUS_5                         27                           65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = AMP PEAK 25(11Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(11Q13.3) MUTATED       63     36    103     16
  AMP PEAK 25(11Q13.3) WILD-TYPE     88     62     79    178
D25V1, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           63                             88
  CLUS_2                           36                             62
  CLUS_3                          103                             79
  CLUS_4                           16                            178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(11Q13.3) MUTATED       73     91     41
  AMP PEAK 25(11Q13.3) WILD-TYPE    168     70    134
D25V2, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           73                            168
  CLUS_2                           91                             70
  CLUS_3                           41                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 25(11Q13.3) MUTATED       48     57     46     14
  AMP PEAK 25(11Q13.3) WILD-TYPE     97     80     90     50
D25V3, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           48                             97
  CLUS_2                           57                             80
  CLUS_3                           46                             90
  CLUS_4                           14                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(11Q13.3) MUTATED       92     47     26
  AMP PEAK 25(11Q13.3) WILD-TYPE    181     63     73
D25V4, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           92                            181
  CLUS_2                           47                             63
  CLUS_3                           26                             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(11Q13.3) MUTATED       96     90     25
  AMP PEAK 25(11Q13.3) WILD-TYPE     74    183    128
D25V5, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           96                             74
  CLUS_2                           90                            183
  CLUS_3                           25                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(11Q13.3) MUTATED       58     35     25     75     18
  AMP PEAK 25(11Q13.3) WILD-TYPE     73     81     73     46    112
D25V6, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           58                             73
  CLUS_2                           35                             81
  CLUS_3                           25                             73
  CLUS_4                           75                             46
  CLUS_5                           18                            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 25(11Q13.3) MUTATED       88     89     38
  AMP PEAK 25(11Q13.3) WILD-TYPE     79    189    134
D25V7, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           88                             79
  CLUS_2                           89                            189
  CLUS_3                           38                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(11Q13.3) MUTATED       49     53     35     67     11
  AMP PEAK 25(11Q13.3) WILD-TYPE     78     90    129     27     78
D25V8, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           49                             78
  CLUS_2                           53                             90
  CLUS_3                           35                            129
  CLUS_4                           67                             27
  CLUS_5                           11                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(11Q13.3) MUTATED       72     60     30     22      7
  AMP PEAK 25(11Q13.3) WILD-TYPE     51     95     91     25     66
D25V9, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           72                             51
  CLUS_2                           60                             95
  CLUS_3                           30                             91
  CLUS_4                           22                             25
  CLUS_5                            7                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 25(11Q13.3) MUTATED       21     47     39     18     66
  AMP PEAK 25(11Q13.3) WILD-TYPE     30     77    105     90     26
D25V10, multiclass
        clus
vv       AMP PEAK 25(11Q13.3) MUTATED AMP PEAK 25(11Q13.3) WILD-TYPE
  CLUS_1                           21                             30
  CLUS_2                           47                             77
  CLUS_3                           39                            105
  CLUS_4                           18                             90
  CLUS_5                           66                             26
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = AMP PEAK 26(12P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(12P12.1) MUTATED       45     45     89     28
  AMP PEAK 26(12P12.1) WILD-TYPE    106     53     93    166
D26V1, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           45                            106
  CLUS_2                           45                             53
  CLUS_3                           89                             93
  CLUS_4                           28                            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(12P12.1) MUTATED       75     78     45
  AMP PEAK 26(12P12.1) WILD-TYPE    166     83    130
D26V2, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           75                            166
  CLUS_2                           78                             83
  CLUS_3                           45                            130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 26(12P12.1) MUTATED       50     38     41     23
  AMP PEAK 26(12P12.1) WILD-TYPE     95     99     95     41
D26V3, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           50                             95
  CLUS_2                           38                             99
  CLUS_3                           41                             95
  CLUS_4                           23                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(12P12.1) MUTATED       96     26     30
  AMP PEAK 26(12P12.1) WILD-TYPE    177     84     69
D26V4, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           96                            177
  CLUS_2                           26                             84
  CLUS_3                           30                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(12P12.1) MUTATED       75     78     44
  AMP PEAK 26(12P12.1) WILD-TYPE     95    195    109
D26V5, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           75                             95
  CLUS_2                           78                            195
  CLUS_3                           44                            109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(12P12.1) MUTATED       54     30     23     59     31
  AMP PEAK 26(12P12.1) WILD-TYPE     77     86     75     62     99
D26V6, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           54                             77
  CLUS_2                           30                             86
  CLUS_3                           23                             75
  CLUS_4                           59                             62
  CLUS_5                           31                             99
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 26(12P12.1) MUTATED       77     80     47
  AMP PEAK 26(12P12.1) WILD-TYPE     90    198    125
D26V7, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           77                             90
  CLUS_2                           80                            198
  CLUS_3                           47                            125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(12P12.1) MUTATED       44     43     49     47     21
  AMP PEAK 26(12P12.1) WILD-TYPE     83    100    115     47     68
D26V8, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           44                             83
  CLUS_2                           43                            100
  CLUS_3                           49                            115
  CLUS_4                           47                             47
  CLUS_5                           21                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(12P12.1) MUTATED       62     50     35     12     19
  AMP PEAK 26(12P12.1) WILD-TYPE     61    105     86     35     54
D26V9, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           62                             61
  CLUS_2                           50                            105
  CLUS_3                           35                             86
  CLUS_4                           12                             35
  CLUS_5                           19                             54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 26(12P12.1) MUTATED       17     42     46     26     47
  AMP PEAK 26(12P12.1) WILD-TYPE     34     82     98     82     45
D26V10, multiclass
        clus
vv       AMP PEAK 26(12P12.1) MUTATED AMP PEAK 26(12P12.1) WILD-TYPE
  CLUS_1                           17                             34
  CLUS_2                           42                             82
  CLUS_3                           46                             98
  CLUS_4                           26                             82
  CLUS_5                           47                             45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = AMP PEAK 27(12Q15) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(12Q15) MUTATED       39     41     55     26
  AMP PEAK 27(12Q15) WILD-TYPE    112     57    127    168
D27V1, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         39                          112
  CLUS_2                         41                           57
  CLUS_3                         55                          127
  CLUS_4                         26                          168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(12Q15) MUTATED       56     53     41
  AMP PEAK 27(12Q15) WILD-TYPE    185    108    134
D27V2, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         56                          185
  CLUS_2                         53                          108
  CLUS_3                         41                          134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 27(12Q15) MUTATED       37     30     35     17
  AMP PEAK 27(12Q15) WILD-TYPE    108    107    101     47
D27V3, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         37                          108
  CLUS_2                         30                          107
  CLUS_3                         35                          101
  CLUS_4                         17                           47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(12Q15) MUTATED       73     21     25
  AMP PEAK 27(12Q15) WILD-TYPE    200     89     74
D27V4, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         73                          200
  CLUS_2                         21                           89
  CLUS_3                         25                           74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(12Q15) MUTATED       45     66     40
  AMP PEAK 27(12Q15) WILD-TYPE    125    207    113
D27V5, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         45                          125
  CLUS_2                         66                          207
  CLUS_3                         40                          113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(12Q15) MUTATED       40     32     18     31     30
  AMP PEAK 27(12Q15) WILD-TYPE     91     84     80     90    100
D27V6, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         40                           91
  CLUS_2                         32                           84
  CLUS_3                         18                           80
  CLUS_4                         31                           90
  CLUS_5                         30                          100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 27(12Q15) MUTATED       54     64     40
  AMP PEAK 27(12Q15) WILD-TYPE    113    214    132
D27V7, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         54                          113
  CLUS_2                         64                          214
  CLUS_3                         40                          132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(12Q15) MUTATED       40     25     50     26     17
  AMP PEAK 27(12Q15) WILD-TYPE     87    118    114     68     72
D27V8, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         40                           87
  CLUS_2                         25                          118
  CLUS_3                         50                          114
  CLUS_4                         26                           68
  CLUS_5                         17                           72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(12Q15) MUTATED       40     37     24      9     19
  AMP PEAK 27(12Q15) WILD-TYPE     83    118     97     38     54
D27V9, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         40                           83
  CLUS_2                         37                          118
  CLUS_3                         24                           97
  CLUS_4                          9                           38
  CLUS_5                         19                           54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 27(12Q15) MUTATED       15     28     39     20     27
  AMP PEAK 27(12Q15) WILD-TYPE     36     96    105     88     65
D27V10, multiclass
        clus
vv       AMP PEAK 27(12Q15) MUTATED AMP PEAK 27(12Q15) WILD-TYPE
  CLUS_1                         15                           36
  CLUS_2                         28                           96
  CLUS_3                         39                          105
  CLUS_4                         20                           88
  CLUS_5                         27                           65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = AMP PEAK 28(13Q12.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(13Q12.3) MUTATED      114     13     57     32
  AMP PEAK 28(13Q12.3) WILD-TYPE     37     85    125    162
D28V1, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                          114                             37
  CLUS_2                           13                             85
  CLUS_3                           57                            125
  CLUS_4                           32                            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(13Q12.3) MUTATED       92     59     46
  AMP PEAK 28(13Q12.3) WILD-TYPE    149    102    129
D28V2, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           92                            149
  CLUS_2                           59                            102
  CLUS_3                           46                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 28(13Q12.3) MUTATED       41     49     41     30
  AMP PEAK 28(13Q12.3) WILD-TYPE    104     88     95     34
D28V3, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           41                            104
  CLUS_2                           49                             88
  CLUS_3                           41                             95
  CLUS_4                           30                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(13Q12.3) MUTATED       91     39     31
  AMP PEAK 28(13Q12.3) WILD-TYPE    182     71     68
D28V4, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           91                            182
  CLUS_2                           39                             71
  CLUS_3                           31                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(13Q12.3) MUTATED       43    122     42
  AMP PEAK 28(13Q12.3) WILD-TYPE    127    151    111
D28V5, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           43                            127
  CLUS_2                          122                            151
  CLUS_3                           42                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(13Q12.3) MUTATED       65     37     50     23     32
  AMP PEAK 28(13Q12.3) WILD-TYPE     66     79     48     98     98
D28V6, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           65                             66
  CLUS_2                           37                             79
  CLUS_3                           50                             48
  CLUS_4                           23                             98
  CLUS_5                           32                             98
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 28(13Q12.3) MUTATED       50    112     51
  AMP PEAK 28(13Q12.3) WILD-TYPE    117    166    121
D28V7, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           50                            117
  CLUS_2                          112                            166
  CLUS_3                           51                            121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(13Q12.3) MUTATED       72     68     38      9     26
  AMP PEAK 28(13Q12.3) WILD-TYPE     55     75    126     85     63
D28V8, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           72                             55
  CLUS_2                           68                             75
  CLUS_3                           38                            126
  CLUS_4                            9                             85
  CLUS_5                           26                             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(13Q12.3) MUTATED       34     63     30     21     27
  AMP PEAK 28(13Q12.3) WILD-TYPE     89     92     91     26     46
D28V9, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           34                             89
  CLUS_2                           63                             92
  CLUS_3                           30                             91
  CLUS_4                           21                             26
  CLUS_5                           27                             46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 28(13Q12.3) MUTATED       30     49     47     40      9
  AMP PEAK 28(13Q12.3) WILD-TYPE     21     75     97     68     83
D28V10, multiclass
        clus
vv       AMP PEAK 28(13Q12.3) MUTATED AMP PEAK 28(13Q12.3) WILD-TYPE
  CLUS_1                           30                             21
  CLUS_2                           49                             75
  CLUS_3                           47                             97
  CLUS_4                           40                             68
  CLUS_5                            9                             83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = AMP PEAK 29(13Q22.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(13Q22.1) MUTATED      125     15     64     39
  AMP PEAK 29(13Q22.1) WILD-TYPE     26     83    118    155
D29V1, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                          125                             26
  CLUS_2                           15                             83
  CLUS_3                           64                            118
  CLUS_4                           39                            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(13Q22.1) MUTATED       97     77     47
  AMP PEAK 29(13Q22.1) WILD-TYPE    144     84    128
D29V2, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           97                            144
  CLUS_2                           77                             84
  CLUS_3                           47                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 29(13Q22.1) MUTATED       54     53     47     30
  AMP PEAK 29(13Q22.1) WILD-TYPE     91     84     89     34
D29V3, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           53                             84
  CLUS_3                           47                             89
  CLUS_4                           30                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(13Q22.1) MUTATED      111     42     31
  AMP PEAK 29(13Q22.1) WILD-TYPE    162     68     68
D29V4, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                          111                            162
  CLUS_2                           42                             68
  CLUS_3                           31                             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(13Q22.1) MUTATED       65    124     42
  AMP PEAK 29(13Q22.1) WILD-TYPE    105    149    111
D29V5, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           65                            105
  CLUS_2                          124                            149
  CLUS_3                           42                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(13Q22.1) MUTATED       83     35     52     31     30
  AMP PEAK 29(13Q22.1) WILD-TYPE     48     81     46     90    100
D29V6, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           83                             48
  CLUS_2                           35                             81
  CLUS_3                           52                             46
  CLUS_4                           31                             90
  CLUS_5                           30                            100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 29(13Q22.1) MUTATED       69    117     52
  AMP PEAK 29(13Q22.1) WILD-TYPE     98    161    120
D29V7, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           69                             98
  CLUS_2                          117                            161
  CLUS_3                           52                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(13Q22.1) MUTATED       78     76     38     19     27
  AMP PEAK 29(13Q22.1) WILD-TYPE     49     67    126     75     62
D29V8, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           78                             49
  CLUS_2                           76                             67
  CLUS_3                           38                            126
  CLUS_4                           19                             75
  CLUS_5                           27                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(13Q22.1) MUTATED       49     69     29     20     32
  AMP PEAK 29(13Q22.1) WILD-TYPE     74     86     92     27     41
D29V9, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           49                             74
  CLUS_2                           69                             86
  CLUS_3                           29                             92
  CLUS_4                           20                             27
  CLUS_5                           32                             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 29(13Q22.1) MUTATED       38     56     46     40     19
  AMP PEAK 29(13Q22.1) WILD-TYPE     13     68     98     68     73
D29V10, multiclass
        clus
vv       AMP PEAK 29(13Q22.1) MUTATED AMP PEAK 29(13Q22.1) WILD-TYPE
  CLUS_1                           38                             13
  CLUS_2                           56                             68
  CLUS_3                           46                             98
  CLUS_4                           40                             68
  CLUS_5                           19                             73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = AMP PEAK 30(14Q13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(14Q13.3) MUTATED       26     13     69      5
  AMP PEAK 30(14Q13.3) WILD-TYPE    125     85    113    189
D30V1, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           26                            125
  CLUS_2                           13                             85
  CLUS_3                           69                            113
  CLUS_4                            5                            189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(14Q13.3) MUTATED       34     52     21
  AMP PEAK 30(14Q13.3) WILD-TYPE    207    109    154
D30V2, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           34                            207
  CLUS_2                           52                            109
  CLUS_3                           21                            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 30(14Q13.3) MUTATED       25     21     23     15
  AMP PEAK 30(14Q13.3) WILD-TYPE    120    116    113     49
D30V3, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           25                            120
  CLUS_2                           21                            116
  CLUS_3                           23                            113
  CLUS_4                           15                             49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(14Q13.3) MUTATED       56     14     14
  AMP PEAK 30(14Q13.3) WILD-TYPE    217     96     85
D30V4, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           56                            217
  CLUS_2                           14                             96
  CLUS_3                           14                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(14Q13.3) MUTATED       53     45     12
  AMP PEAK 30(14Q13.3) WILD-TYPE    117    228    141
D30V5, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           53                            117
  CLUS_2                           45                            228
  CLUS_3                           12                            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(14Q13.3) MUTATED       29     15     13     46      7
  AMP PEAK 30(14Q13.3) WILD-TYPE    102    101     85     75    123
D30V6, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           29                            102
  CLUS_2                           15                            101
  CLUS_3                           13                             85
  CLUS_4                           46                             75
  CLUS_5                            7                            123
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 30(14Q13.3) MUTATED       52     36     23
  AMP PEAK 30(14Q13.3) WILD-TYPE    115    242    149
D30V7, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           52                            115
  CLUS_2                           36                            242
  CLUS_3                           23                            149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(14Q13.3) MUTATED       21     26     11     41     12
  AMP PEAK 30(14Q13.3) WILD-TYPE    106    117    153     53     77
D30V8, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           21                            106
  CLUS_2                           26                            117
  CLUS_3                           11                            153
  CLUS_4                           41                             53
  CLUS_5                           12                             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(14Q13.3) MUTATED       41     25     19      9      5
  AMP PEAK 30(14Q13.3) WILD-TYPE     82    130    102     38     68
D30V9, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                           41                             82
  CLUS_2                           25                            130
  CLUS_3                           19                            102
  CLUS_4                            9                             38
  CLUS_5                            5                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 30(14Q13.3) MUTATED        9     24     12     13     41
  AMP PEAK 30(14Q13.3) WILD-TYPE     42    100    132     95     51
D30V10, multiclass
        clus
vv       AMP PEAK 30(14Q13.3) MUTATED AMP PEAK 30(14Q13.3) WILD-TYPE
  CLUS_1                            9                             42
  CLUS_2                           24                            100
  CLUS_3                           12                            132
  CLUS_4                           13                             95
  CLUS_5                           41                             51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = AMP PEAK 31(15Q26.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(15Q26.1) MUTATED       57     40     58     13
  AMP PEAK 31(15Q26.1) WILD-TYPE     94     58    124    181
D31V1, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           57                             94
  CLUS_2                           40                             58
  CLUS_3                           58                            124
  CLUS_4                           13                            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(15Q26.1) MUTATED       71     54     32
  AMP PEAK 31(15Q26.1) WILD-TYPE    170    107    143
D31V2, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           71                            170
  CLUS_2                           54                            107
  CLUS_3                           32                            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 31(15Q26.1) MUTATED       37     43     22     25
  AMP PEAK 31(15Q26.1) WILD-TYPE    108     94    114     39
D31V3, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           37                            108
  CLUS_2                           43                             94
  CLUS_3                           22                            114
  CLUS_4                           25                             39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(15Q26.1) MUTATED       75     37     15
  AMP PEAK 31(15Q26.1) WILD-TYPE    198     73     84
D31V4, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           75                            198
  CLUS_2                           37                             73
  CLUS_3                           15                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(15Q26.1) MUTATED       57     82     20
  AMP PEAK 31(15Q26.1) WILD-TYPE    113    191    133
D31V5, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           57                            113
  CLUS_2                           82                            191
  CLUS_3                           20                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(15Q26.1) MUTATED       58     34     25     32     10
  AMP PEAK 31(15Q26.1) WILD-TYPE     73     82     73     89    120
D31V6, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           58                             73
  CLUS_2                           34                             82
  CLUS_3                           25                             73
  CLUS_4                           32                             89
  CLUS_5                           10                            120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 31(15Q26.1) MUTATED       57     75     34
  AMP PEAK 31(15Q26.1) WILD-TYPE    110    203    138
D31V7, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           57                            110
  CLUS_2                           75                            203
  CLUS_3                           34                            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(15Q26.1) MUTATED       52     43     40     20     11
  AMP PEAK 31(15Q26.1) WILD-TYPE     75    100    124     74     78
D31V8, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           52                             75
  CLUS_2                           43                            100
  CLUS_3                           40                            124
  CLUS_4                           20                             74
  CLUS_5                           11                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(15Q26.1) MUTATED       40     51     22     13     22
  AMP PEAK 31(15Q26.1) WILD-TYPE     83    104     99     34     51
D31V9, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           40                             83
  CLUS_2                           51                            104
  CLUS_3                           22                             99
  CLUS_4                           13                             34
  CLUS_5                           22                             51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 31(15Q26.1) MUTATED       20     52     33     22     21
  AMP PEAK 31(15Q26.1) WILD-TYPE     31     72    111     86     71
D31V10, multiclass
        clus
vv       AMP PEAK 31(15Q26.1) MUTATED AMP PEAK 31(15Q26.1) WILD-TYPE
  CLUS_1                           20                             31
  CLUS_2                           52                             72
  CLUS_3                           33                            111
  CLUS_4                           22                             86
  CLUS_5                           21                             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = AMP PEAK 32(17Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(17Q12) MUTATED       85     44     79     14
  AMP PEAK 32(17Q12) WILD-TYPE     66     54    103    180
D32V1, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         85                           66
  CLUS_2                         44                           54
  CLUS_3                         79                          103
  CLUS_4                         14                          180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       94     72     42
  AMP PEAK 32(17Q12) WILD-TYPE    147     89    133
D32V2, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         94                          147
  CLUS_2                         72                           89
  CLUS_3                         42                          133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 32(17Q12) MUTATED       42     48     37     29
  AMP PEAK 32(17Q12) WILD-TYPE    103     89     99     35
D32V3, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         42                          103
  CLUS_2                         48                           89
  CLUS_3                         37                           99
  CLUS_4                         29                           35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       89     42     25
  AMP PEAK 32(17Q12) WILD-TYPE    184     68     74
D32V4, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         89                          184
  CLUS_2                         42                           68
  CLUS_3                         25                           74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       66    116     30
  AMP PEAK 32(17Q12) WILD-TYPE    104    157    123
D32V5, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         66                          104
  CLUS_2                        116                          157
  CLUS_3                         30                          123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       69     47     28     41     27
  AMP PEAK 32(17Q12) WILD-TYPE     62     69     70     80    103
D32V6, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         69                           62
  CLUS_2                         47                           69
  CLUS_3                         28                           70
  CLUS_4                         41                           80
  CLUS_5                         27                          103
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 32(17Q12) MUTATED       70    102     46
  AMP PEAK 32(17Q12) WILD-TYPE     97    176    126
D32V7, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         70                           97
  CLUS_2                        102                          176
  CLUS_3                         46                          126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       64     59     47     29     19
  AMP PEAK 32(17Q12) WILD-TYPE     63     84    117     65     70
D32V8, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         64                           63
  CLUS_2                         59                           84
  CLUS_3                         47                          117
  CLUS_4                         29                           65
  CLUS_5                         19                           70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       50     64     32     15     23
  AMP PEAK 32(17Q12) WILD-TYPE     73     91     89     32     50
D32V9, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         50                           73
  CLUS_2                         64                           91
  CLUS_3                         32                           89
  CLUS_4                         15                           32
  CLUS_5                         23                           50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 32(17Q12) MUTATED       23     58     48     27     28
  AMP PEAK 32(17Q12) WILD-TYPE     28     66     96     81     64
D32V10, multiclass
        clus
vv       AMP PEAK 32(17Q12) MUTATED AMP PEAK 32(17Q12) WILD-TYPE
  CLUS_1                         23                           28
  CLUS_2                         58                           66
  CLUS_3                         48                           96
  CLUS_4                         27                           81
  CLUS_5                         28                           64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = AMP PEAK 33(18P11.32) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 33(18P11.32) MUTATED       45     31     84     18
  AMP PEAK 33(18P11.32) WILD-TYPE    106     67     98    176
D33V1, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            45                             106
  CLUS_2                            31                              67
  CLUS_3                            84                              98
  CLUS_4                            18                             176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(18P11.32) MUTATED       52     74     42
  AMP PEAK 33(18P11.32) WILD-TYPE    189     87    133
D33V2, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            52                             189
  CLUS_2                            74                              87
  CLUS_3                            42                             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 33(18P11.32) MUTATED       46     37     36     17
  AMP PEAK 33(18P11.32) WILD-TYPE     99    100    100     47
D33V3, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            46                              99
  CLUS_2                            37                             100
  CLUS_3                            36                             100
  CLUS_4                            17                              47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(18P11.32) MUTATED       89     25     22
  AMP PEAK 33(18P11.32) WILD-TYPE    184     85     77
D33V4, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            89                             184
  CLUS_2                            25                              85
  CLUS_3                            22                              77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(18P11.32) MUTATED       60     85     28
  AMP PEAK 33(18P11.32) WILD-TYPE    110    188    125
D33V5, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            60                             110
  CLUS_2                            85                             188
  CLUS_3                            28                             125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(18P11.32) MUTATED       50     37     24     46     16
  AMP PEAK 33(18P11.32) WILD-TYPE     81     79     74     75    114
D33V6, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            50                              81
  CLUS_2                            37                              79
  CLUS_3                            24                              74
  CLUS_4                            46                              75
  CLUS_5                            16                             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 33(18P11.32) MUTATED       66     77     33
  AMP PEAK 33(18P11.32) WILD-TYPE    101    201    139
D33V7, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            66                             101
  CLUS_2                            77                             201
  CLUS_3                            33                             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(18P11.32) MUTATED       52     40     32     41     11
  AMP PEAK 33(18P11.32) WILD-TYPE     75    103    132     53     78
D33V8, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            52                              75
  CLUS_2                            40                             103
  CLUS_3                            32                             132
  CLUS_4                            41                              53
  CLUS_5                            11                              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(18P11.32) MUTATED       51     50     26     13     12
  AMP PEAK 33(18P11.32) WILD-TYPE     72    105     95     34     61
D33V9, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            51                              72
  CLUS_2                            50                             105
  CLUS_3                            26                              95
  CLUS_4                            13                              34
  CLUS_5                            12                              61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 33(18P11.32) MUTATED       19     41     31     21     40
  AMP PEAK 33(18P11.32) WILD-TYPE     32     83    113     87     52
D33V10, multiclass
        clus
vv       AMP PEAK 33(18P11.32) MUTATED AMP PEAK 33(18P11.32) WILD-TYPE
  CLUS_1                            19                              32
  CLUS_2                            41                              83
  CLUS_3                            31                             113
  CLUS_4                            21                              87
  CLUS_5                            40                              52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = AMP PEAK 34(18Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 34(18Q11.2) MUTATED       71     40     65     22
  AMP PEAK 34(18Q11.2) WILD-TYPE     80     58    117    172
D34V1, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           71                             80
  CLUS_2                           40                             58
  CLUS_3                           65                            117
  CLUS_4                           22                            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(18Q11.2) MUTATED       79     55     47
  AMP PEAK 34(18Q11.2) WILD-TYPE    162    106    128
D34V2, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           79                            162
  CLUS_2                           55                            106
  CLUS_3                           47                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 34(18Q11.2) MUTATED       47     42     41     17
  AMP PEAK 34(18Q11.2) WILD-TYPE     98     95     95     47
D34V3, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           47                             98
  CLUS_2                           42                             95
  CLUS_3                           41                             95
  CLUS_4                           17                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(18Q11.2) MUTATED       90     27     30
  AMP PEAK 34(18Q11.2) WILD-TYPE    183     83     69
D34V4, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           90                            183
  CLUS_2                           27                             83
  CLUS_3                           30                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(18Q11.2) MUTATED       49    103     35
  AMP PEAK 34(18Q11.2) WILD-TYPE    121    170    118
D34V5, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           49                            121
  CLUS_2                          103                            170
  CLUS_3                           35                            118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(18Q11.2) MUTATED       63     52     20     31     21
  AMP PEAK 34(18Q11.2) WILD-TYPE     68     64     78     90    109
D34V6, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           63                             68
  CLUS_2                           52                             64
  CLUS_3                           20                             78
  CLUS_4                           31                             90
  CLUS_5                           21                            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 34(18Q11.2) MUTATED       51    102     43
  AMP PEAK 34(18Q11.2) WILD-TYPE    116    176    129
D34V7, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           51                            116
  CLUS_2                          102                            176
  CLUS_3                           43                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(18Q11.2) MUTATED       60     50     43     21     22
  AMP PEAK 34(18Q11.2) WILD-TYPE     67     93    121     73     67
D34V8, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           60                             67
  CLUS_2                           50                             93
  CLUS_3                           43                            121
  CLUS_4                           21                             73
  CLUS_5                           22                             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(18Q11.2) MUTATED       34     64     27     17     18
  AMP PEAK 34(18Q11.2) WILD-TYPE     89     91     94     30     55
D34V9, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           34                             89
  CLUS_2                           64                             91
  CLUS_3                           27                             94
  CLUS_4                           17                             30
  CLUS_5                           18                             55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 34(18Q11.2) MUTATED       21     51     40     28     20
  AMP PEAK 34(18Q11.2) WILD-TYPE     30     73    104     80     72
D34V10, multiclass
        clus
vv       AMP PEAK 34(18Q11.2) MUTATED AMP PEAK 34(18Q11.2) WILD-TYPE
  CLUS_1                           21                             30
  CLUS_2                           51                             73
  CLUS_3                           40                            104
  CLUS_4                           28                             80
  CLUS_5                           20                             72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = AMP PEAK 35(19Q12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 35(19Q12) MUTATED       72     40     60     13
  AMP PEAK 35(19Q12) WILD-TYPE     79     58    122    181
D35V1, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         72                           79
  CLUS_2                         40                           58
  CLUS_3                         60                          122
  CLUS_4                         13                          181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q12) MUTATED       60     71     42
  AMP PEAK 35(19Q12) WILD-TYPE    181     90    133
D35V2, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         60                          181
  CLUS_2                         71                           90
  CLUS_3                         42                          133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 35(19Q12) MUTATED       61     31     29     18
  AMP PEAK 35(19Q12) WILD-TYPE     84    106    107     46
D35V3, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         61                           84
  CLUS_2                         31                          106
  CLUS_3                         29                          107
  CLUS_4                         18                           46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q12) MUTATED       97     23     19
  AMP PEAK 35(19Q12) WILD-TYPE    176     87     80
D35V4, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         97                          176
  CLUS_2                         23                           87
  CLUS_3                         19                           80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q12) MUTATED       49     92     35
  AMP PEAK 35(19Q12) WILD-TYPE    121    181    118
D35V5, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         49                          121
  CLUS_2                         92                          181
  CLUS_3                         35                          118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q12) MUTATED       69     27     25     28     27
  AMP PEAK 35(19Q12) WILD-TYPE     62     89     73     93    103
D35V6, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         69                           62
  CLUS_2                         27                           89
  CLUS_3                         25                           73
  CLUS_4                         28                           93
  CLUS_5                         27                          103
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 35(19Q12) MUTATED       64     75     45
  AMP PEAK 35(19Q12) WILD-TYPE    103    203    127
D35V7, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         64                          103
  CLUS_2                         75                          203
  CLUS_3                         45                          127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q12) MUTATED       83     37     24     23     17
  AMP PEAK 35(19Q12) WILD-TYPE     44    106    140     71     72
D35V8, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         83                           44
  CLUS_2                         37                          106
  CLUS_3                         24                          140
  CLUS_4                         23                           71
  CLUS_5                         17                           72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q12) MUTATED       46     48     32     13     19
  AMP PEAK 35(19Q12) WILD-TYPE     77    107     89     34     54
D35V9, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         46                           77
  CLUS_2                         48                          107
  CLUS_3                         32                           89
  CLUS_4                         13                           34
  CLUS_5                         19                           54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 35(19Q12) MUTATED       34     40     29     33     22
  AMP PEAK 35(19Q12) WILD-TYPE     17     84    115     75     70
D35V10, multiclass
        clus
vv       AMP PEAK 35(19Q12) MUTATED AMP PEAK 35(19Q12) WILD-TYPE
  CLUS_1                         34                           17
  CLUS_2                         40                           84
  CLUS_3                         29                          115
  CLUS_4                         33                           75
  CLUS_5                         22                           70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = AMP PEAK 36(19Q13.43) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 36(19Q13.43) MUTATED       57     32     55     20
  AMP PEAK 36(19Q13.43) WILD-TYPE     94     66    127    174
D36V1, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            57                              94
  CLUS_2                            32                              66
  CLUS_3                            55                             127
  CLUS_4                            20                             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(19Q13.43) MUTATED       67     53     33
  AMP PEAK 36(19Q13.43) WILD-TYPE    174    108    142
D36V2, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            67                             174
  CLUS_2                            53                             108
  CLUS_3                            33                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 36(19Q13.43) MUTATED       50     27     29     12
  AMP PEAK 36(19Q13.43) WILD-TYPE     95    110    107     52
D36V3, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            50                              95
  CLUS_2                            27                             110
  CLUS_3                            29                             107
  CLUS_4                            12                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(19Q13.43) MUTATED       77     22     19
  AMP PEAK 36(19Q13.43) WILD-TYPE    196     88     80
D36V4, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            77                             196
  CLUS_2                            22                              88
  CLUS_3                            19                              80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(19Q13.43) MUTATED       45     82     33
  AMP PEAK 36(19Q13.43) WILD-TYPE    125    191    120
D36V5, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            45                             125
  CLUS_2                            82                             191
  CLUS_3                            33                             120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(19Q13.43) MUTATED       46     27     23     33     31
  AMP PEAK 36(19Q13.43) WILD-TYPE     85     89     75     88     99
D36V6, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            46                              85
  CLUS_2                            27                              89
  CLUS_3                            23                              75
  CLUS_4                            33                              88
  CLUS_5                            31                              99
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 36(19Q13.43) MUTATED       51     79     32
  AMP PEAK 36(19Q13.43) WILD-TYPE    116    199    140
D36V7, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            51                             116
  CLUS_2                            79                             199
  CLUS_3                            32                             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(19Q13.43) MUTATED       52     44     29     23     14
  AMP PEAK 36(19Q13.43) WILD-TYPE     75     99    135     71     75
D36V8, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            52                              75
  CLUS_2                            44                              99
  CLUS_3                            29                             135
  CLUS_4                            23                              71
  CLUS_5                            14                              75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(19Q13.43) MUTATED       42     48     21     12     13
  AMP PEAK 36(19Q13.43) WILD-TYPE     81    107    100     35     60
D36V9, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            42                              81
  CLUS_2                            48                             107
  CLUS_3                            21                             100
  CLUS_4                            12                              35
  CLUS_5                            13                              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 36(19Q13.43) MUTATED       22     39     34     19     22
  AMP PEAK 36(19Q13.43) WILD-TYPE     29     85    110     89     70
D36V10, multiclass
        clus
vv       AMP PEAK 36(19Q13.43) MUTATED AMP PEAK 36(19Q13.43) WILD-TYPE
  CLUS_1                            22                              29
  CLUS_2                            39                              85
  CLUS_3                            34                             110
  CLUS_4                            19                              89
  CLUS_5                            22                              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = AMP PEAK 37(20Q13.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 37(20Q13.2) MUTATED      137     77    139     63
  AMP PEAK 37(20Q13.2) WILD-TYPE     14     21     43    131
D37V1, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          137                             14
  CLUS_2                           77                             21
  CLUS_3                          139                             43
  CLUS_4                           63                            131
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(20Q13.2) MUTATED      164    114    106
  AMP PEAK 37(20Q13.2) WILD-TYPE     77     47     69
D37V2, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          164                             77
  CLUS_2                          114                             47
  CLUS_3                          106                             69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 37(20Q13.2) MUTATED      101     93     81     44
  AMP PEAK 37(20Q13.2) WILD-TYPE     44     44     55     20
D37V3, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          101                             44
  CLUS_2                           93                             44
  CLUS_3                           81                             55
  CLUS_4                           44                             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(20Q13.2) MUTATED      190     75     54
  AMP PEAK 37(20Q13.2) WILD-TYPE     83     35     45
D37V4, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          190                             83
  CLUS_2                           75                             35
  CLUS_3                           54                             45
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(20Q13.2) MUTATED      105    205     90
  AMP PEAK 37(20Q13.2) WILD-TYPE     65     68     63
D37V5, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          105                             65
  CLUS_2                          205                             68
  CLUS_3                           90                             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(20Q13.2) MUTATED      117     82     58     68     75
  AMP PEAK 37(20Q13.2) WILD-TYPE     14     34     40     53     55
D37V6, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          117                             14
  CLUS_2                           82                             34
  CLUS_3                           58                             40
  CLUS_4                           68                             53
  CLUS_5                           75                             55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 37(20Q13.2) MUTATED      114    194    102
  AMP PEAK 37(20Q13.2) WILD-TYPE     53     84     70
D37V7, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          114                             53
  CLUS_2                          194                             84
  CLUS_3                          102                             70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(20Q13.2) MUTATED      119    102     95     49     45
  AMP PEAK 37(20Q13.2) WILD-TYPE      8     41     69     45     44
D37V8, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                          119                              8
  CLUS_2                          102                             41
  CLUS_3                           95                             69
  CLUS_4                           49                             45
  CLUS_5                           45                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(20Q13.2) MUTATED       85    113     69     30     45
  AMP PEAK 37(20Q13.2) WILD-TYPE     38     42     52     17     28
D37V9, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                           85                             38
  CLUS_2                          113                             42
  CLUS_3                           69                             52
  CLUS_4                           30                             17
  CLUS_5                           45                             28
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 37(20Q13.2) MUTATED       47     96     82     68     49
  AMP PEAK 37(20Q13.2) WILD-TYPE      4     28     62     40     43
D37V10, multiclass
        clus
vv       AMP PEAK 37(20Q13.2) MUTATED AMP PEAK 37(20Q13.2) WILD-TYPE
  CLUS_1                           47                              4
  CLUS_2                           96                             28
  CLUS_3                           82                             62
  CLUS_4                           68                             40
  CLUS_5                           49                             43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = AMP PEAK 38(XQ28) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 38(XQ28) MUTATED       41     22     70     22
  AMP PEAK 38(XQ28) WILD-TYPE    110     76    112    172
D38V1, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        41                         110
  CLUS_2                        22                          76
  CLUS_3                        70                         112
  CLUS_4                        22                         172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 38(XQ28) MUTATED       65     59     21
  AMP PEAK 38(XQ28) WILD-TYPE    176    102    154
D38V2, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        65                         176
  CLUS_2                        59                         102
  CLUS_3                        21                         154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMP PEAK 38(XQ28) MUTATED       32     35     33     13
  AMP PEAK 38(XQ28) WILD-TYPE    113    102    103     51
D38V3, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        32                         113
  CLUS_2                        35                         102
  CLUS_3                        33                         103
  CLUS_4                        13                          51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 38(XQ28) MUTATED       69     27     17
  AMP PEAK 38(XQ28) WILD-TYPE    204     83     82
D38V4, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        69                         204
  CLUS_2                        27                          83
  CLUS_3                        17                          82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 38(XQ28) MUTATED       66     68     13
  AMP PEAK 38(XQ28) WILD-TYPE    104    205    140
D38V5, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        66                         104
  CLUS_2                        68                         205
  CLUS_3                        13                         140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 38(XQ28) MUTATED       25     25     31     50     16
  AMP PEAK 38(XQ28) WILD-TYPE    106     91     67     71    114
D38V6, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        25                         106
  CLUS_2                        25                          91
  CLUS_3                        31                          67
  CLUS_4                        50                          71
  CLUS_5                        16                         114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  AMP PEAK 38(XQ28) MUTATED       61     68     24
  AMP PEAK 38(XQ28) WILD-TYPE    106    210    148
D38V7, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        61                         106
  CLUS_2                        68                         210
  CLUS_3                        24                         148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 38(XQ28) MUTATED       30     43     21     45     14
  AMP PEAK 38(XQ28) WILD-TYPE     97    100    143     49     75
D38V8, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        30                          97
  CLUS_2                        43                         100
  CLUS_3                        21                         143
  CLUS_4                        45                          49
  CLUS_5                        14                          75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 38(XQ28) MUTATED       47     43     16     15     11
  AMP PEAK 38(XQ28) WILD-TYPE     76    112    105     32     62
D38V9, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                        47                          76
  CLUS_2                        43                         112
  CLUS_3                        16                         105
  CLUS_4                        15                          32
  CLUS_5                        11                          62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMP PEAK 38(XQ28) MUTATED        8     40     21     19     44
  AMP PEAK 38(XQ28) WILD-TYPE     43     84    123     89     48
D38V10, multiclass
        clus
vv       AMP PEAK 38(XQ28) MUTATED AMP PEAK 38(XQ28) WILD-TYPE
  CLUS_1                         8                          43
  CLUS_2                        40                          84
  CLUS_3                        21                         123
  CLUS_4                        19                          89
  CLUS_5                        44                          48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = DEL PEAK  1(1P36.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       80     51     71      8
  DEL PEAK  1(1P36.11) WILD-TYPE     71     47    111    186
D39V1, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           80                             71
  CLUS_2                           51                             47
  CLUS_3                           71                            111
  CLUS_4                            8                            186
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       87     70     35
  DEL PEAK  1(1P36.11) WILD-TYPE    154     91    140
D39V2, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           87                            154
  CLUS_2                           70                             91
  CLUS_3                           35                            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  1(1P36.11) MUTATED       47     54     28     23
  DEL PEAK  1(1P36.11) WILD-TYPE     98     83    108     41
D39V3, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           47                             98
  CLUS_2                           54                             83
  CLUS_3                           28                            108
  CLUS_4                           23                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       88     45     19
  DEL PEAK  1(1P36.11) WILD-TYPE    185     65     80
D39V4, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           88                            185
  CLUS_2                           45                             65
  CLUS_3                           19                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       63    113     27
  DEL PEAK  1(1P36.11) WILD-TYPE    107    160    126
D39V5, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           63                            107
  CLUS_2                          113                            160
  CLUS_3                           27                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       62     49     32     41     19
  DEL PEAK  1(1P36.11) WILD-TYPE     69     67     66     80    111
D39V6, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           62                             69
  CLUS_2                           49                             67
  CLUS_3                           32                             66
  CLUS_4                           41                             80
  CLUS_5                           19                            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  1(1P36.11) MUTATED       68    102     37
  DEL PEAK  1(1P36.11) WILD-TYPE     99    176    135
D39V7, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           68                             99
  CLUS_2                          102                            176
  CLUS_3                           37                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       66     55     41     30     15
  DEL PEAK  1(1P36.11) WILD-TYPE     61     88    123     64     74
D39V8, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           66                             61
  CLUS_2                           55                             88
  CLUS_3                           41                            123
  CLUS_4                           30                             64
  CLUS_5                           15                             74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       52     64     27     12     22
  DEL PEAK  1(1P36.11) WILD-TYPE     71     91     94     35     51
D39V9, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           52                             71
  CLUS_2                           64                             91
  CLUS_3                           27                             94
  CLUS_4                           12                             35
  CLUS_5                           22                             51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  1(1P36.11) MUTATED       27     58     36     25     31
  DEL PEAK  1(1P36.11) WILD-TYPE     24     66    108     83     61
D39V10, multiclass
        clus
vv       DEL PEAK  1(1P36.11) MUTATED DEL PEAK  1(1P36.11) WILD-TYPE
  CLUS_1                           27                             24
  CLUS_2                           58                             66
  CLUS_3                           36                            108
  CLUS_4                           25                             83
  CLUS_5                           31                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = DEL PEAK  2(1P13.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       61     25     65      5
  DEL PEAK  2(1P13.2) WILD-TYPE     90     73    117    189
D40V1, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          61                            90
  CLUS_2                          25                            73
  CLUS_3                          65                           117
  CLUS_4                           5                           189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       66     64     17
  DEL PEAK  2(1P13.2) WILD-TYPE    175     97    158
D40V2, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          66                           175
  CLUS_2                          64                            97
  CLUS_3                          17                           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  2(1P13.2) MUTATED       47     29     30     15
  DEL PEAK  2(1P13.2) WILD-TYPE     98    108    106     49
D40V3, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          47                            98
  CLUS_2                          29                           108
  CLUS_3                          30                           106
  CLUS_4                          15                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       78     22     21
  DEL PEAK  2(1P13.2) WILD-TYPE    195     88     78
D40V4, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          78                           195
  CLUS_2                          22                            88
  CLUS_3                          21                            78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       55     76     19
  DEL PEAK  2(1P13.2) WILD-TYPE    115    197    134
D40V5, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          55                           115
  CLUS_2                          76                           197
  CLUS_3                          19                           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       44     25     28     41     12
  DEL PEAK  2(1P13.2) WILD-TYPE     87     91     70     80    118
D40V6, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          44                            87
  CLUS_2                          25                            91
  CLUS_3                          28                            70
  CLUS_4                          41                            80
  CLUS_5                          12                           118
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  2(1P13.2) MUTATED       52     74     28
  DEL PEAK  2(1P13.2) WILD-TYPE    115    204    144
D40V7, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          52                           115
  CLUS_2                          74                           204
  CLUS_3                          28                           144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       41     46     25     32     10
  DEL PEAK  2(1P13.2) WILD-TYPE     86     97    139     62     79
D40V8, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          41                            86
  CLUS_2                          46                            97
  CLUS_3                          25                           139
  CLUS_4                          32                            62
  CLUS_5                          10                            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       41     48     26      7     13
  DEL PEAK  2(1P13.2) WILD-TYPE     82    107     95     40     60
D40V9, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          41                            82
  CLUS_2                          48                           107
  CLUS_3                          26                            95
  CLUS_4                           7                            40
  CLUS_5                          13                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  2(1P13.2) MUTATED       15     38     32     18     32
  DEL PEAK  2(1P13.2) WILD-TYPE     36     86    112     90     60
D40V10, multiclass
        clus
vv       DEL PEAK  2(1P13.2) MUTATED DEL PEAK  2(1P13.2) WILD-TYPE
  CLUS_1                          15                            36
  CLUS_2                          38                            86
  CLUS_3                          32                           112
  CLUS_4                          18                            90
  CLUS_5                          32                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = DEL PEAK  3(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED       16      7     18      5
  DEL PEAK  3(1Q44) WILD-TYPE    135     91    164    189
D41V1, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        16                         135
  CLUS_2                         7                          91
  CLUS_3                        18                         164
  CLUS_4                         5                         189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       21     14      7
  DEL PEAK  3(1Q44) WILD-TYPE    220    147    168
D41V2, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        21                         220
  CLUS_2                        14                         147
  CLUS_3                         7                         168
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  3(1Q44) MUTATED       16      8      8      2
  DEL PEAK  3(1Q44) WILD-TYPE    129    129    128     62
D41V3, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        16                         129
  CLUS_2                         8                         129
  CLUS_3                         8                         128
  CLUS_4                         2                          62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       24      4      6
  DEL PEAK  3(1Q44) WILD-TYPE    249    106     93
D41V4, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        24                         249
  CLUS_2                         4                         106
  CLUS_3                         6                          93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       14     26      5
  DEL PEAK  3(1Q44) WILD-TYPE    156    247    148
D41V5, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        14                         156
  CLUS_2                        26                         247
  CLUS_3                         5                         148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED       17     10      4      9      5
  DEL PEAK  3(1Q44) WILD-TYPE    114    106     94    112    125
D41V6, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        17                         114
  CLUS_2                        10                         106
  CLUS_3                         4                          94
  CLUS_4                         9                         112
  CLUS_5                         5                         125
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  3(1Q44) MUTATED       12     27      6
  DEL PEAK  3(1Q44) WILD-TYPE    155    251    166
D41V7, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        12                         155
  CLUS_2                        27                         251
  CLUS_3                         6                         166
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED       14     11     12      6      2
  DEL PEAK  3(1Q44) WILD-TYPE    113    132    152     88     87
D41V8, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        14                         113
  CLUS_2                        11                         132
  CLUS_3                        12                         152
  CLUS_4                         6                          88
  CLUS_5                         2                          87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED       11     14      5      3      4
  DEL PEAK  3(1Q44) WILD-TYPE    112    141    116     44     69
D41V9, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                        11                         112
  CLUS_2                        14                         141
  CLUS_3                         5                         116
  CLUS_4                         3                          44
  CLUS_5                         4                          69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  3(1Q44) MUTATED        7      8     13      3      6
  DEL PEAK  3(1Q44) WILD-TYPE     44    116    131    105     86
D41V10, multiclass
        clus
vv       DEL PEAK  3(1Q44) MUTATED DEL PEAK  3(1Q44) WILD-TYPE
  CLUS_1                         7                          44
  CLUS_2                         8                         116
  CLUS_3                        13                         131
  CLUS_4                         3                         105
  CLUS_5                         6                          86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = DEL PEAK  4(1Q44) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1Q44) MUTATED       10      8     19      6
  DEL PEAK  4(1Q44) WILD-TYPE    141     90    163    188
D42V1, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        10                         141
  CLUS_2                         8                          90
  CLUS_3                        19                         163
  CLUS_4                         6                         188
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1Q44) MUTATED       21     16      6
  DEL PEAK  4(1Q44) WILD-TYPE    220    145    169
D42V2, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        21                         220
  CLUS_2                        16                         145
  CLUS_3                         6                         169
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  4(1Q44) MUTATED       14      6      8      1
  DEL PEAK  4(1Q44) WILD-TYPE    131    131    128     63
D42V3, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        14                         131
  CLUS_2                         6                         131
  CLUS_3                         8                         128
  CLUS_4                         1                          63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1Q44) MUTATED       20      3      6
  DEL PEAK  4(1Q44) WILD-TYPE    253    107     93
D42V4, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        20                         253
  CLUS_2                         3                         107
  CLUS_3                         6                          93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1Q44) MUTATED       14     20      9
  DEL PEAK  4(1Q44) WILD-TYPE    156    253    144
D42V5, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        14                         156
  CLUS_2                        20                         253
  CLUS_3                         9                         144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(1Q44) MUTATED       15      8      3     11      6
  DEL PEAK  4(1Q44) WILD-TYPE    116    108     95    110    124
D42V6, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        15                         116
  CLUS_2                         8                         108
  CLUS_3                         3                          95
  CLUS_4                        11                         110
  CLUS_5                         6                         124
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  4(1Q44) MUTATED       13     21      8
  DEL PEAK  4(1Q44) WILD-TYPE    154    257    164
D42V7, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        13                         154
  CLUS_2                        21                         257
  CLUS_3                         8                         164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(1Q44) MUTATED        9      9     12      8      4
  DEL PEAK  4(1Q44) WILD-TYPE    118    134    152     86     85
D42V8, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                         9                         118
  CLUS_2                         9                         134
  CLUS_3                        12                         152
  CLUS_4                         8                          86
  CLUS_5                         4                          85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(1Q44) MUTATED       10     14      7      3      4
  DEL PEAK  4(1Q44) WILD-TYPE    113    141    114     44     69
D42V9, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                        10                         113
  CLUS_2                        14                         141
  CLUS_3                         7                         114
  CLUS_4                         3                          44
  CLUS_5                         4                          69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  4(1Q44) MUTATED        4      8     12      6      8
  DEL PEAK  4(1Q44) WILD-TYPE     47    116    132    102     84
D42V10, multiclass
        clus
vv       DEL PEAK  4(1Q44) MUTATED DEL PEAK  4(1Q44) WILD-TYPE
  CLUS_1                         4                          47
  CLUS_2                         8                         116
  CLUS_3                        12                         132
  CLUS_4                         6                         102
  CLUS_5                         8                          84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DEL PEAK  5(2Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q22.1) MUTATED       31     28     60      7
  DEL PEAK  5(2Q22.1) WILD-TYPE    120     70    122    187
D43V1, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          31                           120
  CLUS_2                          28                            70
  CLUS_3                          60                           122
  CLUS_4                           7                           187
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       32     66     21
  DEL PEAK  5(2Q22.1) WILD-TYPE    209     95    154
D43V2, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          32                           209
  CLUS_2                          66                            95
  CLUS_3                          21                           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  5(2Q22.1) MUTATED       36     28     23     12
  DEL PEAK  5(2Q22.1) WILD-TYPE    109    109    113     52
D43V3, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          36                           109
  CLUS_2                          28                           109
  CLUS_3                          23                           113
  CLUS_4                          12                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       67     20     12
  DEL PEAK  5(2Q22.1) WILD-TYPE    206     90     87
D43V4, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          67                           206
  CLUS_2                          20                            90
  CLUS_3                          12                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       65     39     15
  DEL PEAK  5(2Q22.1) WILD-TYPE    105    234    138
D43V5, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          65                           105
  CLUS_2                          39                           234
  CLUS_3                          15                           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q22.1) MUTATED       26     21     11     52      9
  DEL PEAK  5(2Q22.1) WILD-TYPE    105     95     87     69    121
D43V6, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          26                           105
  CLUS_2                          21                            95
  CLUS_3                          11                            87
  CLUS_4                          52                            69
  CLUS_5                           9                           121
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  5(2Q22.1) MUTATED       64     39     22
  DEL PEAK  5(2Q22.1) WILD-TYPE    103    239    150
D43V7, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          64                           103
  CLUS_2                          39                           239
  CLUS_3                          22                           150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q22.1) MUTATED       33     18     21     46      7
  DEL PEAK  5(2Q22.1) WILD-TYPE     94    125    143     48     82
D43V8, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          33                            94
  CLUS_2                          18                           125
  CLUS_3                          21                           143
  CLUS_4                          46                            48
  CLUS_5                           7                            82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q22.1) MUTATED       48     26     12      9     13
  DEL PEAK  5(2Q22.1) WILD-TYPE     75    129    109     38     60
D43V9, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          48                            75
  CLUS_2                          26                           129
  CLUS_3                          12                           109
  CLUS_4                           9                            38
  CLUS_5                          13                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  5(2Q22.1) MUTATED       11     25     17      9     46
  DEL PEAK  5(2Q22.1) WILD-TYPE     40     99    127     99     46
D43V10, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) MUTATED DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                          25                            99
  CLUS_3                          17                           127
  CLUS_4                           9                            99
  CLUS_5                          46                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = DEL PEAK  6(2Q32.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(2Q32.1) MUTATED       29     20     26     12
  DEL PEAK  6(2Q32.1) WILD-TYPE    122     78    156    182
D44V1, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          29                           122
  CLUS_2                          20                            78
  CLUS_3                          26                           156
  CLUS_4                          12                           182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q32.1) MUTATED       33     30     16
  DEL PEAK  6(2Q32.1) WILD-TYPE    208    131    159
D44V2, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          33                           208
  CLUS_2                          30                           131
  CLUS_3                          16                           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  6(2Q32.1) MUTATED       20     17     21      8
  DEL PEAK  6(2Q32.1) WILD-TYPE    125    120    115     56
D44V3, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          20                           125
  CLUS_2                          17                           120
  CLUS_3                          21                           115
  CLUS_4                           8                            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q32.1) MUTATED       43     10     13
  DEL PEAK  6(2Q32.1) WILD-TYPE    230    100     86
D44V4, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          43                           230
  CLUS_2                          10                           100
  CLUS_3                          13                            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q32.1) MUTATED       29     35     17
  DEL PEAK  6(2Q32.1) WILD-TYPE    141    238    136
D44V5, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          29                           141
  CLUS_2                          35                           238
  CLUS_3                          17                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(2Q32.1) MUTATED       24     16      9     20     12
  DEL PEAK  6(2Q32.1) WILD-TYPE    107    100     89    101    118
D44V6, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          24                           107
  CLUS_2                          16                           100
  CLUS_3                           9                            89
  CLUS_4                          20                           101
  CLUS_5                          12                           118
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  6(2Q32.1) MUTATED       30     34     22
  DEL PEAK  6(2Q32.1) WILD-TYPE    137    244    150
D44V7, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          30                           137
  CLUS_2                          34                           244
  CLUS_3                          22                           150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(2Q32.1) MUTATED       29     14     17     15     11
  DEL PEAK  6(2Q32.1) WILD-TYPE     98    129    147     79     78
D44V8, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          29                            98
  CLUS_2                          14                           129
  CLUS_3                          17                           147
  CLUS_4                          15                            79
  CLUS_5                          11                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(2Q32.1) MUTATED       22     22     15      4      8
  DEL PEAK  6(2Q32.1) WILD-TYPE    101    133    106     43     65
D44V9, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                          22                           101
  CLUS_2                          22                           133
  CLUS_3                          15                           106
  CLUS_4                           4                            43
  CLUS_5                           8                            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  6(2Q32.1) MUTATED        9     19     15     13     15
  DEL PEAK  6(2Q32.1) WILD-TYPE     42    105    129     95     77
D44V10, multiclass
        clus
vv       DEL PEAK  6(2Q32.1) MUTATED DEL PEAK  6(2Q32.1) WILD-TYPE
  CLUS_1                           9                            42
  CLUS_2                          19                           105
  CLUS_3                          15                           129
  CLUS_4                          13                            95
  CLUS_5                          15                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = DEL PEAK  7(2Q33.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q33.3) MUTATED       23     18     39      5
  DEL PEAK  7(2Q33.3) WILD-TYPE    128     80    143    189
D45V1, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          23                           128
  CLUS_2                          18                            80
  CLUS_3                          39                           143
  CLUS_4                           5                           189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q33.3) MUTATED       28     39     15
  DEL PEAK  7(2Q33.3) WILD-TYPE    213    122    160
D45V2, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          28                           213
  CLUS_2                          39                           122
  CLUS_3                          15                           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  7(2Q33.3) MUTATED       17     20     17     10
  DEL PEAK  7(2Q33.3) WILD-TYPE    128    117    119     54
D45V3, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          17                           128
  CLUS_2                          20                           117
  CLUS_3                          17                           119
  CLUS_4                          10                            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q33.3) MUTATED       44     11      9
  DEL PEAK  7(2Q33.3) WILD-TYPE    229     99     90
D45V4, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          44                           229
  CLUS_2                          11                            99
  CLUS_3                           9                            90
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q33.3) MUTATED       36     34     12
  DEL PEAK  7(2Q33.3) WILD-TYPE    134    239    141
D45V5, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          36                           134
  CLUS_2                          34                           239
  CLUS_3                          12                           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(2Q33.3) MUTATED       22     15     10     27      8
  DEL PEAK  7(2Q33.3) WILD-TYPE    109    101     88     94    122
D45V6, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          22                           109
  CLUS_2                          15                           101
  CLUS_3                          10                            88
  CLUS_4                          27                            94
  CLUS_5                           8                           122
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  7(2Q33.3) MUTATED       39     29     15
  DEL PEAK  7(2Q33.3) WILD-TYPE    128    249    157
D45V7, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          39                           128
  CLUS_2                          29                           249
  CLUS_3                          15                           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(2Q33.3) MUTATED       23     15     15     25      5
  DEL PEAK  7(2Q33.3) WILD-TYPE    104    128    149     69     84
D45V8, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          23                           104
  CLUS_2                          15                           128
  CLUS_3                          15                           149
  CLUS_4                          25                            69
  CLUS_5                           5                            84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(2Q33.3) MUTATED       25     19     14      4      9
  DEL PEAK  7(2Q33.3) WILD-TYPE     98    136    107     43     64
D45V9, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                          25                            98
  CLUS_2                          19                           136
  CLUS_3                          14                           107
  CLUS_4                           4                            43
  CLUS_5                           9                            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  7(2Q33.3) MUTATED        6     16     15      9     25
  DEL PEAK  7(2Q33.3) WILD-TYPE     45    108    129     99     67
D45V10, multiclass
        clus
vv       DEL PEAK  7(2Q33.3) MUTATED DEL PEAK  7(2Q33.3) WILD-TYPE
  CLUS_1                           6                            45
  CLUS_2                          16                           108
  CLUS_3                          15                           129
  CLUS_4                           9                            99
  CLUS_5                          25                            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = DEL PEAK  8(2Q37.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.2) MUTATED       33     25     54     10
  DEL PEAK  8(2Q37.2) WILD-TYPE    118     73    128    184
D46V1, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          33                           118
  CLUS_2                          25                            73
  CLUS_3                          54                           128
  CLUS_4                          10                           184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.2) MUTATED       38     56     23
  DEL PEAK  8(2Q37.2) WILD-TYPE    203    105    152
D46V2, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          38                           203
  CLUS_2                          56                           105
  CLUS_3                          23                           152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  8(2Q37.2) MUTATED       33     28     27      9
  DEL PEAK  8(2Q37.2) WILD-TYPE    112    109    109     55
D46V3, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          33                           112
  CLUS_2                          28                           109
  CLUS_3                          27                           109
  CLUS_4                           9                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.2) MUTATED       62     19     16
  DEL PEAK  8(2Q37.2) WILD-TYPE    211     91     83
D46V4, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          62                           211
  CLUS_2                          19                            91
  CLUS_3                          16                            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.2) MUTATED       51     48     21
  DEL PEAK  8(2Q37.2) WILD-TYPE    119    225    132
D46V5, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          51                           119
  CLUS_2                          48                           225
  CLUS_3                          21                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(2Q37.2) MUTATED       36     22     14     38     10
  DEL PEAK  8(2Q37.2) WILD-TYPE     95     94     84     83    120
D46V6, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          36                            95
  CLUS_2                          22                            94
  CLUS_3                          14                            84
  CLUS_4                          38                            83
  CLUS_5                          10                           120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  8(2Q37.2) MUTATED       48     48     24
  DEL PEAK  8(2Q37.2) WILD-TYPE    119    230    148
D46V7, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          48                           119
  CLUS_2                          48                           230
  CLUS_3                          24                           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(2Q37.2) MUTATED       33     25     19     36      7
  DEL PEAK  8(2Q37.2) WILD-TYPE     94    118    145     58     82
D46V8, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          33                            94
  CLUS_2                          25                           118
  CLUS_3                          19                           145
  CLUS_4                          36                            58
  CLUS_5                           7                            82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(2Q37.2) MUTATED       36     33     15      8     15
  DEL PEAK  8(2Q37.2) WILD-TYPE     87    122    106     39     58
D46V9, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          36                            87
  CLUS_2                          33                           122
  CLUS_3                          15                           106
  CLUS_4                           8                            39
  CLUS_5                          15                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  8(2Q37.2) MUTATED       11     26     20     15     35
  DEL PEAK  8(2Q37.2) WILD-TYPE     40     98    124     93     57
D46V10, multiclass
        clus
vv       DEL PEAK  8(2Q37.2) MUTATED DEL PEAK  8(2Q37.2) WILD-TYPE
  CLUS_1                          11                            40
  CLUS_2                          26                            98
  CLUS_3                          20                           124
  CLUS_4                          15                            93
  CLUS_5                          35                            57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = DEL PEAK  9(3P26.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P26.2) MUTATED       81     38    121     10
  DEL PEAK  9(3P26.2) WILD-TYPE     70     60     61    184
D47V1, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          81                            70
  CLUS_2                          38                            60
  CLUS_3                         121                            61
  CLUS_4                          10                           184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P26.2) MUTATED       86    103     46
  DEL PEAK  9(3P26.2) WILD-TYPE    155     58    129
D47V2, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          86                           155
  CLUS_2                         103                            58
  CLUS_3                          46                           129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK  9(3P26.2) MUTATED       58     56     51     27
  DEL PEAK  9(3P26.2) WILD-TYPE     87     81     85     37
D47V3, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          58                            87
  CLUS_2                          56                            81
  CLUS_3                          51                            85
  CLUS_4                          27                            37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P26.2) MUTATED      116     44     32
  DEL PEAK  9(3P26.2) WILD-TYPE    157     66     67
D47V4, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                         116                           157
  CLUS_2                          44                            66
  CLUS_3                          32                            67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P26.2) MUTATED       96    108     34
  DEL PEAK  9(3P26.2) WILD-TYPE     74    165    119
D47V5, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          96                            74
  CLUS_2                         108                           165
  CLUS_3                          34                           119
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3P26.2) MUTATED       59     35     35     84     25
  DEL PEAK  9(3P26.2) WILD-TYPE     72     81     63     37    105
D47V6, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          59                            72
  CLUS_2                          35                            81
  CLUS_3                          35                            63
  CLUS_4                          84                            37
  CLUS_5                          25                           105
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK  9(3P26.2) MUTATED      100    104     43
  DEL PEAK  9(3P26.2) WILD-TYPE     67    174    129
D47V7, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                         100                            67
  CLUS_2                         104                           174
  CLUS_3                          43                           129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3P26.2) MUTATED       63     56     39     74     15
  DEL PEAK  9(3P26.2) WILD-TYPE     64     87    125     20     74
D47V8, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          63                            64
  CLUS_2                          56                            87
  CLUS_3                          39                           125
  CLUS_4                          74                            20
  CLUS_5                          15                            74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3P26.2) MUTATED       79     64     38     20     15
  DEL PEAK  9(3P26.2) WILD-TYPE     44     91     83     27     58
D47V9, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          79                            44
  CLUS_2                          64                            91
  CLUS_3                          38                            83
  CLUS_4                          20                            27
  CLUS_5                          15                            58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK  9(3P26.2) MUTATED       28     50     35     30     73
  DEL PEAK  9(3P26.2) WILD-TYPE     23     74    109     78     19
D47V10, multiclass
        clus
vv       DEL PEAK  9(3P26.2) MUTATED DEL PEAK  9(3P26.2) WILD-TYPE
  CLUS_1                          28                            23
  CLUS_2                          50                            74
  CLUS_3                          35                           109
  CLUS_4                          30                            78
  CLUS_5                          73                            19
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = DEL PEAK 10(3P14.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3P14.2) MUTATED       79     44    134     25
  DEL PEAK 10(3P14.2) WILD-TYPE     72     54     48    169
D48V1, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          79                            72
  CLUS_2                          44                            54
  CLUS_3                         134                            48
  CLUS_4                          25                           169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3P14.2) MUTATED      104    115     50
  DEL PEAK 10(3P14.2) WILD-TYPE    137     46    125
D48V2, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                         104                           137
  CLUS_2                         115                            46
  CLUS_3                          50                           125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 10(3P14.2) MUTATED       69     55     58     32
  DEL PEAK 10(3P14.2) WILD-TYPE     76     82     78     32
D48V3, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          69                            76
  CLUS_2                          55                            82
  CLUS_3                          58                            78
  CLUS_4                          32                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3P14.2) MUTATED      135     41     38
  DEL PEAK 10(3P14.2) WILD-TYPE    138     69     61
D48V4, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                         135                           138
  CLUS_2                          41                            69
  CLUS_3                          38                            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3P14.2) MUTATED      110    122     38
  DEL PEAK 10(3P14.2) WILD-TYPE     60    151    115
D48V5, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                         110                            60
  CLUS_2                         122                           151
  CLUS_3                          38                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3P14.2) MUTATED       68     43     39     95     25
  DEL PEAK 10(3P14.2) WILD-TYPE     63     73     59     26    105
D48V6, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          68                            63
  CLUS_2                          43                            73
  CLUS_3                          39                            59
  CLUS_4                          95                            26
  CLUS_5                          25                           105
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 10(3P14.2) MUTATED      112    117     50
  DEL PEAK 10(3P14.2) WILD-TYPE     55    161    122
D48V7, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                         112                            55
  CLUS_2                         117                           161
  CLUS_3                          50                           122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3P14.2) MUTATED       68     64     47     83     17
  DEL PEAK 10(3P14.2) WILD-TYPE     59     79    117     11     72
D48V8, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          68                            59
  CLUS_2                          64                            79
  CLUS_3                          47                           117
  CLUS_4                          83                            11
  CLUS_5                          17                            72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3P14.2) MUTATED       87     71     45     17     25
  DEL PEAK 10(3P14.2) WILD-TYPE     36     84     76     30     48
D48V9, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          87                            36
  CLUS_2                          71                            84
  CLUS_3                          45                            76
  CLUS_4                          17                            30
  CLUS_5                          25                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 10(3P14.2) MUTATED       26     61     45     31     82
  DEL PEAK 10(3P14.2) WILD-TYPE     25     63     99     77     10
D48V10, multiclass
        clus
vv       DEL PEAK 10(3P14.2) MUTATED DEL PEAK 10(3P14.2) WILD-TYPE
  CLUS_1                          26                            25
  CLUS_2                          61                            63
  CLUS_3                          45                            99
  CLUS_4                          31                            77
  CLUS_5                          82                            10
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = DEL PEAK 11(3Q11.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q11.1) MUTATED       53     11     30      4
  DEL PEAK 11(3Q11.1) WILD-TYPE     98     87    152    190
D49V1, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          53                            98
  CLUS_2                          11                            87
  CLUS_3                          30                           152
  CLUS_4                           4                           190
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q11.1) MUTATED       47     34     11
  DEL PEAK 11(3Q11.1) WILD-TYPE    194    127    164
D49V2, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          47                           194
  CLUS_2                          34                           127
  CLUS_3                          11                           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 11(3Q11.1) MUTATED       28     16     21     13
  DEL PEAK 11(3Q11.1) WILD-TYPE    117    121    115     51
D49V3, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          28                           117
  CLUS_2                          16                           121
  CLUS_3                          21                           115
  CLUS_4                          13                            51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q11.1) MUTATED       50     13     15
  DEL PEAK 11(3Q11.1) WILD-TYPE    223     97     84
D49V4, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          50                           223
  CLUS_2                          13                            97
  CLUS_3                          15                            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q11.1) MUTATED       28     49     16
  DEL PEAK 11(3Q11.1) WILD-TYPE    142    224    137
D49V5, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          28                           142
  CLUS_2                          49                           224
  CLUS_3                          16                           137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(3Q11.1) MUTATED       35      9     21     18     10
  DEL PEAK 11(3Q11.1) WILD-TYPE     96    107     77    103    120
D49V6, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          35                            96
  CLUS_2                           9                           107
  CLUS_3                          21                            77
  CLUS_4                          18                           103
  CLUS_5                          10                           120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 11(3Q11.1) MUTATED       28     48     21
  DEL PEAK 11(3Q11.1) WILD-TYPE    139    230    151
D49V7, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          28                           139
  CLUS_2                          48                           230
  CLUS_3                          21                           151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(3Q11.1) MUTATED       34     27     11     16      9
  DEL PEAK 11(3Q11.1) WILD-TYPE     93    116    153     78     80
D49V8, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          34                            93
  CLUS_2                          27                           116
  CLUS_3                          11                           153
  CLUS_4                          16                            78
  CLUS_5                           9                            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(3Q11.1) MUTATED       24     28     16      7      9
  DEL PEAK 11(3Q11.1) WILD-TYPE     99    127    105     40     64
D49V9, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          24                            99
  CLUS_2                          28                           127
  CLUS_3                          16                           105
  CLUS_4                           7                            40
  CLUS_5                           9                            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 11(3Q11.1) MUTATED       17     20     16     15     16
  DEL PEAK 11(3Q11.1) WILD-TYPE     34    104    128     93     76
D49V10, multiclass
        clus
vv       DEL PEAK 11(3Q11.1) MUTATED DEL PEAK 11(3Q11.1) WILD-TYPE
  CLUS_1                          17                            34
  CLUS_2                          20                           104
  CLUS_3                          16                           128
  CLUS_4                          15                            93
  CLUS_5                          16                            76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = DEL PEAK 12(3Q26.31) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(3Q26.31) MUTATED       47      4     10      4
  DEL PEAK 12(3Q26.31) WILD-TYPE    104     94    172    190
D50V1, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           47                            104
  CLUS_2                            4                             94
  CLUS_3                           10                            172
  CLUS_4                            4                            190
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(3Q26.31) MUTATED       34     21      6
  DEL PEAK 12(3Q26.31) WILD-TYPE    207    140    169
D50V2, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           34                            207
  CLUS_2                           21                            140
  CLUS_3                            6                            169
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 12(3Q26.31) MUTATED       20     16     12      3
  DEL PEAK 12(3Q26.31) WILD-TYPE    125    121    124     61
D50V3, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           20                            125
  CLUS_2                           16                            121
  CLUS_3                           12                            124
  CLUS_4                            3                             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(3Q26.31) MUTATED       31     13      7
  DEL PEAK 12(3Q26.31) WILD-TYPE    242     97     92
D50V4, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           31                            242
  CLUS_2                           13                             97
  CLUS_3                            7                             92
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(3Q26.31) MUTATED       13     38     13
  DEL PEAK 12(3Q26.31) WILD-TYPE    157    235    140
D50V5, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           13                            157
  CLUS_2                           38                            235
  CLUS_3                           13                            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(3Q26.31) MUTATED       28      5     19      4      8
  DEL PEAK 12(3Q26.31) WILD-TYPE    103    111     79    117    122
D50V6, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           28                            103
  CLUS_2                            5                            111
  CLUS_3                           19                             79
  CLUS_4                            4                            117
  CLUS_5                            8                            122
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 12(3Q26.31) MUTATED       16     38     10
  DEL PEAK 12(3Q26.31) WILD-TYPE    151    240    162
D50V7, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           16                            151
  CLUS_2                           38                            240
  CLUS_3                           10                            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(3Q26.31) MUTATED       28     22      6      2      6
  DEL PEAK 12(3Q26.31) WILD-TYPE     99    121    158     92     83
D50V8, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           28                             99
  CLUS_2                           22                            121
  CLUS_3                            6                            158
  CLUS_4                            2                             92
  CLUS_5                            6                             83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(3Q26.31) MUTATED       14     22      9      4      5
  DEL PEAK 12(3Q26.31) WILD-TYPE    109    133    112     43     68
D50V9, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           14                            109
  CLUS_2                           22                            133
  CLUS_3                            9                            112
  CLUS_4                            4                             43
  CLUS_5                            5                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 12(3Q26.31) MUTATED       18     15      8     11      2
  DEL PEAK 12(3Q26.31) WILD-TYPE     33    109    136     97     90
D50V10, multiclass
        clus
vv       DEL PEAK 12(3Q26.31) MUTATED DEL PEAK 12(3Q26.31) WILD-TYPE
  CLUS_1                           18                             33
  CLUS_2                           15                            109
  CLUS_3                            8                            136
  CLUS_4                           11                             97
  CLUS_5                            2                             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = DEL PEAK 13(4P16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4P16.3) MUTATED      101     62     93     15
  DEL PEAK 13(4P16.3) WILD-TYPE     50     36     89    179
D51V1, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                         101                            50
  CLUS_2                          62                            36
  CLUS_3                          93                            89
  CLUS_4                          15                           179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4P16.3) MUTATED       96     95     61
  DEL PEAK 13(4P16.3) WILD-TYPE    145     66    114
D51V2, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          96                           145
  CLUS_2                          95                            66
  CLUS_3                          61                           114
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 13(4P16.3) MUTATED       65     59     64     23
  DEL PEAK 13(4P16.3) WILD-TYPE     80     78     72     41
D51V3, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          65                            80
  CLUS_2                          59                            78
  CLUS_3                          64                            72
  CLUS_4                          23                            41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4P16.3) MUTATED      121     46     44
  DEL PEAK 13(4P16.3) WILD-TYPE    152     64     55
D51V4, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                         121                           152
  CLUS_2                          46                            64
  CLUS_3                          44                            55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4P16.3) MUTATED       87    118     56
  DEL PEAK 13(4P16.3) WILD-TYPE     83    155     97
D51V5, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          87                            83
  CLUS_2                         118                           155
  CLUS_3                          56                            97
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4P16.3) MUTATED       78     43     34     68     38
  DEL PEAK 13(4P16.3) WILD-TYPE     53     73     64     53     92
D51V6, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          78                            53
  CLUS_2                          43                            73
  CLUS_3                          34                            64
  CLUS_4                          68                            53
  CLUS_5                          38                            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 13(4P16.3) MUTATED      100    106     64
  DEL PEAK 13(4P16.3) WILD-TYPE     67    172    108
D51V7, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                         100                            67
  CLUS_2                         106                           172
  CLUS_3                          64                           108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4P16.3) MUTATED       79     67     41     53     30
  DEL PEAK 13(4P16.3) WILD-TYPE     48     76    123     41     59
D51V8, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          79                            48
  CLUS_2                          67                            76
  CLUS_3                          41                           123
  CLUS_4                          53                            41
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4P16.3) MUTATED       76     66     49     27     16
  DEL PEAK 13(4P16.3) WILD-TYPE     47     89     72     20     57
D51V9, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          76                            47
  CLUS_2                          66                            89
  CLUS_3                          49                            72
  CLUS_4                          27                            20
  CLUS_5                          16                            57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 13(4P16.3) MUTATED       37     55     41     48     53
  DEL PEAK 13(4P16.3) WILD-TYPE     14     69    103     60     39
D51V10, multiclass
        clus
vv       DEL PEAK 13(4P16.3) MUTATED DEL PEAK 13(4P16.3) WILD-TYPE
  CLUS_1                          37                            14
  CLUS_2                          55                            69
  CLUS_3                          41                           103
  CLUS_4                          48                            60
  CLUS_5                          53                            39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = DEL PEAK 14(4P15.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4P15.2) MUTATED       99     66     92     12
  DEL PEAK 14(4P15.2) WILD-TYPE     52     32     90    182
D52V1, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          99                            52
  CLUS_2                          66                            32
  CLUS_3                          92                            90
  CLUS_4                          12                           182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4P15.2) MUTATED       96     93     60
  DEL PEAK 14(4P15.2) WILD-TYPE    145     68    115
D52V2, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          96                           145
  CLUS_2                          93                            68
  CLUS_3                          60                           115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 14(4P15.2) MUTATED       62     57     59     22
  DEL PEAK 14(4P15.2) WILD-TYPE     83     80     77     42
D52V3, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          62                            83
  CLUS_2                          57                            80
  CLUS_3                          59                            77
  CLUS_4                          22                            42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4P15.2) MUTATED      112     47     41
  DEL PEAK 14(4P15.2) WILD-TYPE    161     63     58
D52V4, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                         112                           161
  CLUS_2                          47                            63
  CLUS_3                          41                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4P15.2) MUTATED       88    118     52
  DEL PEAK 14(4P15.2) WILD-TYPE     82    155    101
D52V5, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          88                            82
  CLUS_2                         118                           155
  CLUS_3                          52                           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(4P15.2) MUTATED       75     44     33     69     37
  DEL PEAK 14(4P15.2) WILD-TYPE     56     72     65     52     93
D52V6, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          75                            56
  CLUS_2                          44                            72
  CLUS_3                          33                            65
  CLUS_4                          69                            52
  CLUS_5                          37                            93
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 14(4P15.2) MUTATED      101    104     63
  DEL PEAK 14(4P15.2) WILD-TYPE     66    174    109
D52V7, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                         101                            66
  CLUS_2                         104                           174
  CLUS_3                          63                           109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(4P15.2) MUTATED       81     63     39     55     30
  DEL PEAK 14(4P15.2) WILD-TYPE     46     80    125     39     59
D52V8, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          81                            46
  CLUS_2                          63                            80
  CLUS_3                          39                           125
  CLUS_4                          55                            39
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(4P15.2) MUTATED       76     64     48     24     16
  DEL PEAK 14(4P15.2) WILD-TYPE     47     91     73     23     57
D52V9, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          76                            47
  CLUS_2                          64                            91
  CLUS_3                          48                            73
  CLUS_4                          24                            23
  CLUS_5                          16                            57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 14(4P15.2) MUTATED       36     54     39     44     55
  DEL PEAK 14(4P15.2) WILD-TYPE     15     70    105     64     37
D52V10, multiclass
        clus
vv       DEL PEAK 14(4P15.2) MUTATED DEL PEAK 14(4P15.2) WILD-TYPE
  CLUS_1                          36                            15
  CLUS_2                          54                            70
  CLUS_3                          39                           105
  CLUS_4                          44                            64
  CLUS_5                          55                            37
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = DEL PEAK 15(4Q22.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(4Q22.1) MUTATED      111     71    100     16
  DEL PEAK 15(4Q22.1) WILD-TYPE     40     27     82    178
D53V1, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                         111                            40
  CLUS_2                          71                            27
  CLUS_3                         100                            82
  CLUS_4                          16                           178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(4Q22.1) MUTATED      126     89     62
  DEL PEAK 15(4Q22.1) WILD-TYPE    115     72    113
D53V2, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                         126                           115
  CLUS_2                          89                            72
  CLUS_3                          62                           113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 15(4Q22.1) MUTATED       71     59     59     34
  DEL PEAK 15(4Q22.1) WILD-TYPE     74     78     77     30
D53V3, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          71                            74
  CLUS_2                          59                            78
  CLUS_3                          59                            77
  CLUS_4                          34                            30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(4Q22.1) MUTATED      139     45     39
  DEL PEAK 15(4Q22.1) WILD-TYPE    134     65     60
D53V4, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                         139                           134
  CLUS_2                          45                            65
  CLUS_3                          39                            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(4Q22.1) MUTATED       83    147     54
  DEL PEAK 15(4Q22.1) WILD-TYPE     87    126     99
D53V5, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          83                            87
  CLUS_2                         147                           126
  CLUS_3                          54                            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(4Q22.1) MUTATED       81     59     46     61     37
  DEL PEAK 15(4Q22.1) WILD-TYPE     50     57     52     60     93
D53V6, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          81                            50
  CLUS_2                          59                            57
  CLUS_3                          46                            52
  CLUS_4                          61                            60
  CLUS_5                          37                            93
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 15(4Q22.1) MUTATED       92    136     66
  DEL PEAK 15(4Q22.1) WILD-TYPE     75    142    106
D53V7, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          92                            75
  CLUS_2                         136                           142
  CLUS_3                          66                           106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(4Q22.1) MUTATED       82     79     57     46     30
  DEL PEAK 15(4Q22.1) WILD-TYPE     45     64    107     48     59
D53V8, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          82                            45
  CLUS_2                          79                            64
  CLUS_3                          57                           107
  CLUS_4                          46                            48
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(4Q22.1) MUTATED       70     80     48     24     27
  DEL PEAK 15(4Q22.1) WILD-TYPE     53     75     73     23     46
D53V9, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          70                            53
  CLUS_2                          80                            75
  CLUS_3                          48                            73
  CLUS_4                          24                            23
  CLUS_5                          27                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 15(4Q22.1) MUTATED       31     71     54     47     46
  DEL PEAK 15(4Q22.1) WILD-TYPE     20     53     90     61     46
D53V10, multiclass
        clus
vv       DEL PEAK 15(4Q22.1) MUTATED DEL PEAK 15(4Q22.1) WILD-TYPE
  CLUS_1                          31                            20
  CLUS_2                          71                            53
  CLUS_3                          54                            90
  CLUS_4                          47                            61
  CLUS_5                          46                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = DEL PEAK 16(4Q34.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(4Q34.3) MUTATED      109     73    101     17
  DEL PEAK 16(4Q34.3) WILD-TYPE     42     25     81    177
D54V1, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                         109                            42
  CLUS_2                          73                            25
  CLUS_3                         101                            81
  CLUS_4                          17                           177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(4Q34.3) MUTATED      124     89     68
  DEL PEAK 16(4Q34.3) WILD-TYPE    117     72    107
D54V2, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                         124                           117
  CLUS_2                          89                            72
  CLUS_3                          68                           107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 16(4Q34.3) MUTATED       78     59     64     26
  DEL PEAK 16(4Q34.3) WILD-TYPE     67     78     72     38
D54V3, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          78                            67
  CLUS_2                          59                            78
  CLUS_3                          64                            72
  CLUS_4                          26                            38
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(4Q34.3) MUTATED      136     50     41
  DEL PEAK 16(4Q34.3) WILD-TYPE    137     60     58
D54V4, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                         136                           137
  CLUS_2                          50                            60
  CLUS_3                          41                            58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(4Q34.3) MUTATED       84    145     60
  DEL PEAK 16(4Q34.3) WILD-TYPE     86    128     93
D54V5, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          84                            86
  CLUS_2                         145                           128
  CLUS_3                          60                            93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(4Q34.3) MUTATED       89     63     41     56     40
  DEL PEAK 16(4Q34.3) WILD-TYPE     42     53     57     65     90
D54V6, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          89                            42
  CLUS_2                          63                            53
  CLUS_3                          41                            57
  CLUS_4                          56                            65
  CLUS_5                          40                            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 16(4Q34.3) MUTATED       91    138     69
  DEL PEAK 16(4Q34.3) WILD-TYPE     76    140    103
D54V7, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          91                            76
  CLUS_2                         138                           140
  CLUS_3                          69                           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(4Q34.3) MUTATED       90     80     56     42     30
  DEL PEAK 16(4Q34.3) WILD-TYPE     37     63    108     52     59
D54V8, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          90                            37
  CLUS_2                          80                            63
  CLUS_3                          56                           108
  CLUS_4                          42                            52
  CLUS_5                          30                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(4Q34.3) MUTATED       68     86     52     26     25
  DEL PEAK 16(4Q34.3) WILD-TYPE     55     69     69     21     48
D54V9, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          68                            55
  CLUS_2                          86                            69
  CLUS_3                          52                            69
  CLUS_4                          26                            21
  CLUS_5                          25                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 16(4Q34.3) MUTATED       38     74     54     49     42
  DEL PEAK 16(4Q34.3) WILD-TYPE     13     50     90     59     50
D54V10, multiclass
        clus
vv       DEL PEAK 16(4Q34.3) MUTATED DEL PEAK 16(4Q34.3) WILD-TYPE
  CLUS_1                          38                            13
  CLUS_2                          74                            50
  CLUS_3                          54                            90
  CLUS_4                          49                            59
  CLUS_5                          42                            50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = DEL PEAK 17(5Q12.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(5Q12.1) MUTATED       98     58    119      7
  DEL PEAK 17(5Q12.1) WILD-TYPE     53     40     63    187
D55V1, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          98                            53
  CLUS_2                          58                            40
  CLUS_3                         119                            63
  CLUS_4                           7                           187
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(5Q12.1) MUTATED      107    118     43
  DEL PEAK 17(5Q12.1) WILD-TYPE    134     43    132
D55V2, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                         107                           134
  CLUS_2                         118                            43
  CLUS_3                          43                           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 17(5Q12.1) MUTATED       73     61     40     32
  DEL PEAK 17(5Q12.1) WILD-TYPE     72     76     96     32
D55V3, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          73                            72
  CLUS_2                          61                            76
  CLUS_3                          40                            96
  CLUS_4                          32                            32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(5Q12.1) MUTATED      131     47     28
  DEL PEAK 17(5Q12.1) WILD-TYPE    142     63     71
D55V4, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                         131                           142
  CLUS_2                          47                            63
  CLUS_3                          28                            71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(5Q12.1) MUTATED       99    138     35
  DEL PEAK 17(5Q12.1) WILD-TYPE     71    135    118
D55V5, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          99                            71
  CLUS_2                         138                           135
  CLUS_3                          35                           118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(5Q12.1) MUTATED       95     53     34     72     18
  DEL PEAK 17(5Q12.1) WILD-TYPE     36     63     64     49    112
D55V6, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          95                            36
  CLUS_2                          53                            63
  CLUS_3                          34                            64
  CLUS_4                          72                            49
  CLUS_5                          18                           112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 17(5Q12.1) MUTATED      105    126     47
  DEL PEAK 17(5Q12.1) WILD-TYPE     62    152    125
D55V7, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                         105                            62
  CLUS_2                         126                           152
  CLUS_3                          47                           125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(5Q12.1) MUTATED       97     70     42     54     15
  DEL PEAK 17(5Q12.1) WILD-TYPE     30     73    122     40     74
D55V8, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          97                            30
  CLUS_2                          70                            73
  CLUS_3                          42                           122
  CLUS_4                          54                            40
  CLUS_5                          15                            74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(5Q12.1) MUTATED       84     80     41     16     27
  DEL PEAK 17(5Q12.1) WILD-TYPE     39     75     80     31     46
D55V9, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          84                            39
  CLUS_2                          80                            75
  CLUS_3                          41                            80
  CLUS_4                          16                            31
  CLUS_5                          27                            46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 17(5Q12.1) MUTATED       42     64     53     35     54
  DEL PEAK 17(5Q12.1) WILD-TYPE      9     60     91     73     38
D55V10, multiclass
        clus
vv       DEL PEAK 17(5Q12.1) MUTATED DEL PEAK 17(5Q12.1) WILD-TYPE
  CLUS_1                          42                             9
  CLUS_2                          64                            60
  CLUS_3                          53                            91
  CLUS_4                          35                            73
  CLUS_5                          54                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = DEL PEAK 18(6P25.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6P25.3) MUTATED       55     41     74     18
  DEL PEAK 18(6P25.3) WILD-TYPE     96     57    108    176
D56V1, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          55                            96
  CLUS_2                          41                            57
  CLUS_3                          74                           108
  CLUS_4                          18                           176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6P25.3) MUTATED       77     72     32
  DEL PEAK 18(6P25.3) WILD-TYPE    164     89    143
D56V2, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          77                           164
  CLUS_2                          72                            89
  CLUS_3                          32                           143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 18(6P25.3) MUTATED       49     36     35     17
  DEL PEAK 18(6P25.3) WILD-TYPE     96    101    101     47
D56V3, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          49                            96
  CLUS_2                          36                           101
  CLUS_3                          35                           101
  CLUS_4                          17                            47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6P25.3) MUTATED       88     25     24
  DEL PEAK 18(6P25.3) WILD-TYPE    185     85     75
D56V4, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          88                           185
  CLUS_2                          25                            85
  CLUS_3                          24                            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6P25.3) MUTATED       61     90     27
  DEL PEAK 18(6P25.3) WILD-TYPE    109    183    126
D56V5, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          61                           109
  CLUS_2                          90                           183
  CLUS_3                          27                           126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(6P25.3) MUTATED       58     42     19     44     15
  DEL PEAK 18(6P25.3) WILD-TYPE     73     74     79     77    115
D56V6, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          58                            73
  CLUS_2                          42                            74
  CLUS_3                          19                            79
  CLUS_4                          44                            77
  CLUS_5                          15                           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 18(6P25.3) MUTATED       60     90     35
  DEL PEAK 18(6P25.3) WILD-TYPE    107    188    137
D56V7, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          60                           107
  CLUS_2                          90                           188
  CLUS_3                          35                           137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(6P25.3) MUTATED       55     50     34     33     13
  DEL PEAK 18(6P25.3) WILD-TYPE     72     93    130     61     76
D56V8, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          55                            72
  CLUS_2                          50                            93
  CLUS_3                          34                           130
  CLUS_4                          33                            61
  CLUS_5                          13                            76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(6P25.3) MUTATED       41     60     28     17     18
  DEL PEAK 18(6P25.3) WILD-TYPE     82     95     93     30     55
D56V9, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          41                            82
  CLUS_2                          60                            95
  CLUS_3                          28                            93
  CLUS_4                          17                            30
  CLUS_5                          18                            55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 18(6P25.3) MUTATED       16     57     35     24     32
  DEL PEAK 18(6P25.3) WILD-TYPE     35     67    109     84     60
D56V10, multiclass
        clus
vv       DEL PEAK 18(6P25.3) MUTATED DEL PEAK 18(6P25.3) WILD-TYPE
  CLUS_1                          16                            35
  CLUS_2                          57                            67
  CLUS_3                          35                           109
  CLUS_4                          24                            84
  CLUS_5                          32                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DEL PEAK 19(6Q16.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q16.3) MUTATED       33     21     80     13
  DEL PEAK 19(6Q16.3) WILD-TYPE    118     77    102    181
D57V1, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          33                           118
  CLUS_2                          21                            77
  CLUS_3                          80                           102
  CLUS_4                          13                           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q16.3) MUTATED       53     52     33
  DEL PEAK 19(6Q16.3) WILD-TYPE    188    109    142
D57V2, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          53                           188
  CLUS_2                          52                           109
  CLUS_3                          33                           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 19(6Q16.3) MUTATED       38     33     27     12
  DEL PEAK 19(6Q16.3) WILD-TYPE    107    104    109     52
D57V3, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          38                           107
  CLUS_2                          33                           104
  CLUS_3                          27                           109
  CLUS_4                          12                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q16.3) MUTATED       67     23     20
  DEL PEAK 19(6Q16.3) WILD-TYPE    206     87     79
D57V4, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          67                           206
  CLUS_2                          23                            87
  CLUS_3                          20                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q16.3) MUTATED       52     68     23
  DEL PEAK 19(6Q16.3) WILD-TYPE    118    205    130
D57V5, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          52                           118
  CLUS_2                          68                           205
  CLUS_3                          23                           130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(6Q16.3) MUTATED       34     37     16     39     17
  DEL PEAK 19(6Q16.3) WILD-TYPE     97     79     82     82    113
D57V6, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          34                            97
  CLUS_2                          37                            79
  CLUS_3                          16                            82
  CLUS_4                          39                            82
  CLUS_5                          17                           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 19(6Q16.3) MUTATED       47     65     33
  DEL PEAK 19(6Q16.3) WILD-TYPE    120    213    139
D57V7, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          47                           120
  CLUS_2                          65                           213
  CLUS_3                          33                           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(6Q16.3) MUTATED       36     32     36     32      9
  DEL PEAK 19(6Q16.3) WILD-TYPE     91    111    128     62     80
D57V8, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          36                            91
  CLUS_2                          32                           111
  CLUS_3                          36                           128
  CLUS_4                          32                            62
  CLUS_5                           9                            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(6Q16.3) MUTATED       37     43     20     13     14
  DEL PEAK 19(6Q16.3) WILD-TYPE     86    112    101     34     59
D57V9, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          37                            86
  CLUS_2                          43                           112
  CLUS_3                          20                           101
  CLUS_4                          13                            34
  CLUS_5                          14                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 19(6Q16.3) MUTATED       13     32     32     18     32
  DEL PEAK 19(6Q16.3) WILD-TYPE     38     92    112     90     60
D57V10, multiclass
        clus
vv       DEL PEAK 19(6Q16.3) MUTATED DEL PEAK 19(6Q16.3) WILD-TYPE
  CLUS_1                          13                            38
  CLUS_2                          32                            92
  CLUS_3                          32                           112
  CLUS_4                          18                            90
  CLUS_5                          32                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = DEL PEAK 20(6Q26) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(6Q26) MUTATED       40     28     70     14
  DEL PEAK 20(6Q26) WILD-TYPE    111     70    112    180
D58V1, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        40                         111
  CLUS_2                        28                          70
  CLUS_3                        70                         112
  CLUS_4                        14                         180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(6Q26) MUTATED       53     53     35
  DEL PEAK 20(6Q26) WILD-TYPE    188    108    140
D58V2, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        53                         188
  CLUS_2                        53                         108
  CLUS_3                        35                         140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 20(6Q26) MUTATED       37     31     31     11
  DEL PEAK 20(6Q26) WILD-TYPE    108    106    105     53
D58V3, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        37                         108
  CLUS_2                        31                         106
  CLUS_3                        31                         105
  CLUS_4                        11                          53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(6Q26) MUTATED       70     19     21
  DEL PEAK 20(6Q26) WILD-TYPE    203     91     78
D58V4, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        70                         203
  CLUS_2                        19                          91
  CLUS_3                        21                          78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(6Q26) MUTATED       51     69     26
  DEL PEAK 20(6Q26) WILD-TYPE    119    204    127
D58V5, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        51                         119
  CLUS_2                        69                         204
  CLUS_3                        26                         127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(6Q26) MUTATED       46     35     12     33     20
  DEL PEAK 20(6Q26) WILD-TYPE     85     81     86     88    110
D58V6, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        46                          85
  CLUS_2                        35                          81
  CLUS_3                        12                          86
  CLUS_4                        33                          88
  CLUS_5                        20                         110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 20(6Q26) MUTATED       54     66     30
  DEL PEAK 20(6Q26) WILD-TYPE    113    212    142
D58V7, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        54                         113
  CLUS_2                        66                         212
  CLUS_3                        30                         142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(6Q26) MUTATED       37     33     39     30     11
  DEL PEAK 20(6Q26) WILD-TYPE     90    110    125     64     78
D58V8, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        37                          90
  CLUS_2                        33                         110
  CLUS_3                        39                         125
  CLUS_4                        30                          64
  CLUS_5                        11                          78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(6Q26) MUTATED       36     39     19     14     16
  DEL PEAK 20(6Q26) WILD-TYPE     87    116    102     33     57
D58V9, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        36                          87
  CLUS_2                        39                         116
  CLUS_3                        19                         102
  CLUS_4                        14                          33
  CLUS_5                        16                          57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 20(6Q26) MUTATED       16     24     37     18     29
  DEL PEAK 20(6Q26) WILD-TYPE     35    100    107     90     63
D58V10, multiclass
        clus
vv       DEL PEAK 20(6Q26) MUTATED DEL PEAK 20(6Q26) WILD-TYPE
  CLUS_1                        16                          35
  CLUS_2                        24                         100
  CLUS_3                        37                         107
  CLUS_4                        18                          90
  CLUS_5                        29                          63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = DEL PEAK 21(7Q31.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q31.1) MUTATED       39     38     40     10
  DEL PEAK 21(7Q31.1) WILD-TYPE    112     60    142    184
D59V1, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          39                           112
  CLUS_2                          38                            60
  CLUS_3                          40                           142
  CLUS_4                          10                           184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q31.1) MUTATED       56     45     18
  DEL PEAK 21(7Q31.1) WILD-TYPE    185    116    157
D59V2, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          56                           185
  CLUS_2                          45                           116
  CLUS_3                          18                           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 21(7Q31.1) MUTATED       28     31     29      9
  DEL PEAK 21(7Q31.1) WILD-TYPE    117    106    107     55
D59V3, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          28                           117
  CLUS_2                          31                           106
  CLUS_3                          29                           107
  CLUS_4                           9                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q31.1) MUTATED       53     26     18
  DEL PEAK 21(7Q31.1) WILD-TYPE    220     84     81
D59V4, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          53                           220
  CLUS_2                          26                            84
  CLUS_3                          18                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q31.1) MUTATED       46     60     18
  DEL PEAK 21(7Q31.1) WILD-TYPE    124    213    135
D59V5, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          46                           124
  CLUS_2                          60                           213
  CLUS_3                          18                           135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(7Q31.1) MUTATED       37     28     12     33     14
  DEL PEAK 21(7Q31.1) WILD-TYPE     94     88     86     88    116
D59V6, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          37                            94
  CLUS_2                          28                            88
  CLUS_3                          12                            86
  CLUS_4                          33                            88
  CLUS_5                          14                           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 21(7Q31.1) MUTATED       46     53     25
  DEL PEAK 21(7Q31.1) WILD-TYPE    121    225    147
D59V7, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          46                           121
  CLUS_2                          53                           225
  CLUS_3                          25                           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(7Q31.1) MUTATED       38     30     21     24     11
  DEL PEAK 21(7Q31.1) WILD-TYPE     89    113    143     70     78
D59V8, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          38                            89
  CLUS_2                          30                           113
  CLUS_3                          21                           143
  CLUS_4                          24                            70
  CLUS_5                          11                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(7Q31.1) MUTATED       34     38     20     12      7
  DEL PEAK 21(7Q31.1) WILD-TYPE     89    117    101     35     66
D59V9, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          34                            89
  CLUS_2                          38                           117
  CLUS_3                          20                           101
  CLUS_4                          12                            35
  CLUS_5                           7                            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 21(7Q31.1) MUTATED       14     38     20     15     24
  DEL PEAK 21(7Q31.1) WILD-TYPE     37     86    124     93     68
D59V10, multiclass
        clus
vv       DEL PEAK 21(7Q31.1) MUTATED DEL PEAK 21(7Q31.1) WILD-TYPE
  CLUS_1                          14                            37
  CLUS_2                          38                            86
  CLUS_3                          20                           124
  CLUS_4                          15                            93
  CLUS_5                          24                            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = DEL PEAK 22(7Q36.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(7Q36.3) MUTATED       49     46     63      7
  DEL PEAK 22(7Q36.3) WILD-TYPE    102     52    119    187
D60V1, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          49                           102
  CLUS_2                          46                            52
  CLUS_3                          63                           119
  CLUS_4                           7                           187
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(7Q36.3) MUTATED       58     65     33
  DEL PEAK 22(7Q36.3) WILD-TYPE    183     96    142
D60V2, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          58                           183
  CLUS_2                          65                            96
  CLUS_3                          33                           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 22(7Q36.3) MUTATED       43     38     34     12
  DEL PEAK 22(7Q36.3) WILD-TYPE    102     99    102     52
D60V3, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          43                           102
  CLUS_2                          38                            99
  CLUS_3                          34                           102
  CLUS_4                          12                            52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(7Q36.3) MUTATED       77     30     20
  DEL PEAK 22(7Q36.3) WILD-TYPE    196     80     79
D60V4, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          77                           196
  CLUS_2                          30                            80
  CLUS_3                          20                            79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(7Q36.3) MUTATED       61     75     25
  DEL PEAK 22(7Q36.3) WILD-TYPE    109    198    128
D60V5, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          61                           109
  CLUS_2                          75                           198
  CLUS_3                          25                           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(7Q36.3) MUTATED       57     36     13     40     15
  DEL PEAK 22(7Q36.3) WILD-TYPE     74     80     85     81    115
D60V6, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          57                            74
  CLUS_2                          36                            80
  CLUS_3                          13                            85
  CLUS_4                          40                            81
  CLUS_5                          15                           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 22(7Q36.3) MUTATED       68     68     27
  DEL PEAK 22(7Q36.3) WILD-TYPE     99    210    145
D60V7, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          68                            99
  CLUS_2                          68                           210
  CLUS_3                          27                           145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(7Q36.3) MUTATED       54     37     29     33     10
  DEL PEAK 22(7Q36.3) WILD-TYPE     73    106    135     61     79
D60V8, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          54                            73
  CLUS_2                          37                           106
  CLUS_3                          29                           135
  CLUS_4                          33                            61
  CLUS_5                          10                            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(7Q36.3) MUTATED       50     44     22     17     14
  DEL PEAK 22(7Q36.3) WILD-TYPE     73    111     99     30     59
D60V9, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          50                            73
  CLUS_2                          44                           111
  CLUS_3                          22                            99
  CLUS_4                          17                            30
  CLUS_5                          14                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 22(7Q36.3) MUTATED       21     41     33     19     33
  DEL PEAK 22(7Q36.3) WILD-TYPE     30     83    111     89     59
D60V10, multiclass
        clus
vv       DEL PEAK 22(7Q36.3) MUTATED DEL PEAK 22(7Q36.3) WILD-TYPE
  CLUS_1                          21                            30
  CLUS_2                          41                            83
  CLUS_3                          33                           111
  CLUS_4                          19                            89
  CLUS_5                          33                            59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = DEL PEAK 23(8P23.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(8P23.2) MUTATED       71     25    105     13
  DEL PEAK 23(8P23.2) WILD-TYPE     80     73     77    181
D61V1, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          71                            80
  CLUS_2                          25                            73
  CLUS_3                         105                            77
  CLUS_4                          13                           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(8P23.2) MUTATED       74     86     42
  DEL PEAK 23(8P23.2) WILD-TYPE    167     75    133
D61V2, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          74                           167
  CLUS_2                          86                            75
  CLUS_3                          42                           133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 23(8P23.2) MUTATED       53     44     48     20
  DEL PEAK 23(8P23.2) WILD-TYPE     92     93     88     44
D61V3, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          53                            92
  CLUS_2                          44                            93
  CLUS_3                          48                            88
  CLUS_4                          20                            44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(8P23.2) MUTATED      106     26     33
  DEL PEAK 23(8P23.2) WILD-TYPE    167     84     66
D61V4, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                         106                           167
  CLUS_2                          26                            84
  CLUS_3                          33                            66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(8P23.2) MUTATED       84     85     36
  DEL PEAK 23(8P23.2) WILD-TYPE     86    188    117
D61V5, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          84                            86
  CLUS_2                          85                           188
  CLUS_3                          36                           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(8P23.2) MUTATED       68     31     26     63     17
  DEL PEAK 23(8P23.2) WILD-TYPE     63     85     72     58    113
D61V6, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          68                            63
  CLUS_2                          31                            85
  CLUS_3                          26                            72
  CLUS_4                          63                            58
  CLUS_5                          17                           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 23(8P23.2) MUTATED       89     87     36
  DEL PEAK 23(8P23.2) WILD-TYPE     78    191    136
D61V7, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          89                            78
  CLUS_2                          87                           191
  CLUS_3                          36                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(8P23.2) MUTATED       61     47     30     57     17
  DEL PEAK 23(8P23.2) WILD-TYPE     66     96    134     37     72
D61V8, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          61                            66
  CLUS_2                          47                            96
  CLUS_3                          30                           134
  CLUS_4                          57                            37
  CLUS_5                          17                            72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(8P23.2) MUTATED       67     48     35     16     19
  DEL PEAK 23(8P23.2) WILD-TYPE     56    107     86     31     54
D61V9, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          67                            56
  CLUS_2                          48                           107
  CLUS_3                          35                            86
  CLUS_4                          16                            31
  CLUS_5                          19                            54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 23(8P23.2) MUTATED       30     40     37     24     54
  DEL PEAK 23(8P23.2) WILD-TYPE     21     84    107     84     38
D61V10, multiclass
        clus
vv       DEL PEAK 23(8P23.2) MUTATED DEL PEAK 23(8P23.2) WILD-TYPE
  CLUS_1                          30                            21
  CLUS_2                          40                            84
  CLUS_3                          37                           107
  CLUS_4                          24                            84
  CLUS_5                          54                            38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = DEL PEAK 24(9P23) MUTATION ANALYSIS
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P23) MUTATED       93     72    119     18
  DEL PEAK 24(9P23) WILD-TYPE     58     26     63    176
D62V1, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        93                          58
  CLUS_2                        72                          26
  CLUS_3                       119                          63
  CLUS_4                        18                         176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P23) MUTATED      115     96     72
  DEL PEAK 24(9P23) WILD-TYPE    126     65    103
D62V2, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                       115                         126
  CLUS_2                        96                          65
  CLUS_3                        72                         103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 24(9P23) MUTATED       79     64     68     25
  DEL PEAK 24(9P23) WILD-TYPE     66     73     68     39
D62V3, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        79                          66
  CLUS_2                        64                          73
  CLUS_3                        68                          68
  CLUS_4                        25                          39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P23) MUTATED      140     51     45
  DEL PEAK 24(9P23) WILD-TYPE    133     59     54
D62V4, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                       140                         133
  CLUS_2                        51                          59
  CLUS_3                        45                          54
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P23) MUTATED       90    147     55
  DEL PEAK 24(9P23) WILD-TYPE     80    126     98
D62V5, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        90                          80
  CLUS_2                       147                         126
  CLUS_3                        55                          98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(9P23) MUTATED       87     63     36     66     40
  DEL PEAK 24(9P23) WILD-TYPE     44     53     62     55     90
D62V6, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        87                          44
  CLUS_2                        63                          53
  CLUS_3                        36                          62
  CLUS_4                        66                          55
  CLUS_5                        40                          90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 24(9P23) MUTATED       97    133     69
  DEL PEAK 24(9P23) WILD-TYPE     70    145    103
D62V7, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        97                          70
  CLUS_2                       133                         145
  CLUS_3                        69                         103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(9P23) MUTATED       83     72     61     54     29
  DEL PEAK 24(9P23) WILD-TYPE     44     71    103     40     60
D62V8, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        83                          44
  CLUS_2                        72                          71
  CLUS_3                        61                         103
  CLUS_4                        54                          40
  CLUS_5                        29                          60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(9P23) MUTATED       74     79     57     22     27
  DEL PEAK 24(9P23) WILD-TYPE     49     76     64     25     46
D62V9, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        74                          49
  CLUS_2                        79                          76
  CLUS_3                        57                          64
  CLUS_4                        22                          25
  CLUS_5                        27                          46
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                             vv
clus                          CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 24(9P23) MUTATED       31     66     62     46     54
  DEL PEAK 24(9P23) WILD-TYPE     20     58     82     62     38
D62V10, multiclass
        clus
vv       DEL PEAK 24(9P23) MUTATED DEL PEAK 24(9P23) WILD-TYPE
  CLUS_1                        31                          20
  CLUS_2                        66                          58
  CLUS_3                        62                          82
  CLUS_4                        46                          62
  CLUS_5                        54                          38
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = DEL PEAK 25(9P21.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.3) MUTATED       94     76    147     17
  DEL PEAK 25(9P21.3) WILD-TYPE     57     22     35    177
D63V1, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          94                            57
  CLUS_2                          76                            22
  CLUS_3                         147                            35
  CLUS_4                          17                           177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.3) MUTATED      118    125     73
  DEL PEAK 25(9P21.3) WILD-TYPE    123     36    102
D63V2, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                         118                           123
  CLUS_2                         125                            36
  CLUS_3                          73                           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 25(9P21.3) MUTATED       77     63     79     37
  DEL PEAK 25(9P21.3) WILD-TYPE     68     74     57     27
D63V3, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          77                            68
  CLUS_2                          63                            74
  CLUS_3                          79                            57
  CLUS_4                          37                            27
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.3) MUTATED      150     53     53
  DEL PEAK 25(9P21.3) WILD-TYPE    123     57     46
D63V4, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                         150                           123
  CLUS_2                          53                            57
  CLUS_3                          53                            46
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.3) MUTATED      123    147     55
  DEL PEAK 25(9P21.3) WILD-TYPE     47    126     98
D63V5, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                         123                            47
  CLUS_2                         147                           126
  CLUS_3                          55                            98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(9P21.3) MUTATED       94     66     35     97     33
  DEL PEAK 25(9P21.3) WILD-TYPE     37     50     63     24     97
D63V6, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          94                            37
  CLUS_2                          66                            50
  CLUS_3                          35                            63
  CLUS_4                          97                            24
  CLUS_5                          33                            97
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 25(9P21.3) MUTATED      121    134     76
  DEL PEAK 25(9P21.3) WILD-TYPE     46    144     96
D63V7, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                         121                            46
  CLUS_2                         134                           144
  CLUS_3                          76                            96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(9P21.3) MUTATED       87     75     60     80     29
  DEL PEAK 25(9P21.3) WILD-TYPE     40     68    104     14     60
D63V8, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          87                            40
  CLUS_2                          75                            68
  CLUS_3                          60                           104
  CLUS_4                          80                            14
  CLUS_5                          29                            60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(9P21.3) MUTATED       97     81     63     27     25
  DEL PEAK 25(9P21.3) WILD-TYPE     26     74     58     20     48
D63V9, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          97                            26
  CLUS_2                          81                            74
  CLUS_3                          63                            58
  CLUS_4                          27                            20
  CLUS_5                          25                            48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 25(9P21.3) MUTATED       35     70     60     48     80
  DEL PEAK 25(9P21.3) WILD-TYPE     16     54     84     60     12
D63V10, multiclass
        clus
vv       DEL PEAK 25(9P21.3) MUTATED DEL PEAK 25(9P21.3) WILD-TYPE
  CLUS_1                          35                            16
  CLUS_2                          70                            54
  CLUS_3                          60                            84
  CLUS_4                          48                            60
  CLUS_5                          80                            12
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = DEL PEAK 26(9Q21.11) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       50     46     76      3
  DEL PEAK 26(9Q21.11) WILD-TYPE    101     52    106    191
D64V1, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           50                            101
  CLUS_2                           46                             52
  CLUS_3                           76                            106
  CLUS_4                            3                            191
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       56     68     42
  DEL PEAK 26(9Q21.11) WILD-TYPE    185     93    133
D64V2, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           56                            185
  CLUS_2                           68                             93
  CLUS_3                           42                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 26(9Q21.11) MUTATED       42     31     44     14
  DEL PEAK 26(9Q21.11) WILD-TYPE    103    106     92     50
D64V3, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           42                            103
  CLUS_2                           31                            106
  CLUS_3                           44                             92
  CLUS_4                           14                             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       80     24     27
  DEL PEAK 26(9Q21.11) WILD-TYPE    193     86     72
D64V4, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           80                            193
  CLUS_2                           24                             86
  CLUS_3                           27                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       60     79     29
  DEL PEAK 26(9Q21.11) WILD-TYPE    110    194    124
D64V5, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           60                            110
  CLUS_2                           79                            194
  CLUS_3                           29                            124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(9Q21.11) MUTATED       61     32     15     41     19
  DEL PEAK 26(9Q21.11) WILD-TYPE     70     84     83     80    111
D64V6, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           61                             70
  CLUS_2                           32                             84
  CLUS_3                           15                             83
  CLUS_4                           41                             80
  CLUS_5                           19                            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 26(9Q21.11) MUTATED       68     63     42
  DEL PEAK 26(9Q21.11) WILD-TYPE     99    215    130
D64V7, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           68                             99
  CLUS_2                           63                            215
  CLUS_3                           42                            130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(9Q21.11) MUTATED       61     30     29     36     17
  DEL PEAK 26(9Q21.11) WILD-TYPE     66    113    135     58     72
D64V8, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           61                             66
  CLUS_2                           30                            113
  CLUS_3                           29                            135
  CLUS_4                           36                             58
  CLUS_5                           17                             72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(9Q21.11) MUTATED       53     38     34     15     11
  DEL PEAK 26(9Q21.11) WILD-TYPE     70    117     87     32     62
D64V9, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           53                             70
  CLUS_2                           38                            117
  CLUS_3                           34                             87
  CLUS_4                           15                             32
  CLUS_5                           11                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 26(9Q21.11) MUTATED       25     30     30     30     36
  DEL PEAK 26(9Q21.11) WILD-TYPE     26     94    114     78     56
D64V10, multiclass
        clus
vv       DEL PEAK 26(9Q21.11) MUTATED DEL PEAK 26(9Q21.11) WILD-TYPE
  CLUS_1                           25                             26
  CLUS_2                           30                             94
  CLUS_3                           30                            114
  CLUS_4                           30                             78
  CLUS_5                           36                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = DEL PEAK 27(10P15.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.3) MUTATED       30     13     80      8
  DEL PEAK 27(10P15.3) WILD-TYPE    121     85    102    186
D65V1, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           30                            121
  CLUS_2                           13                             85
  CLUS_3                           80                            102
  CLUS_4                            8                            186
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.3) MUTATED       46     52     24
  DEL PEAK 27(10P15.3) WILD-TYPE    195    109    151
D65V2, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           46                            195
  CLUS_2                           52                            109
  CLUS_3                           24                            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 27(10P15.3) MUTATED       28     28     31     15
  DEL PEAK 27(10P15.3) WILD-TYPE    117    109    105     49
D65V3, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           28                            117
  CLUS_2                           28                            109
  CLUS_3                           31                            105
  CLUS_4                           15                             49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.3) MUTATED       55     25     22
  DEL PEAK 27(10P15.3) WILD-TYPE    218     85     77
D65V4, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           55                            218
  CLUS_2                           25                             85
  CLUS_3                           22                             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.3) MUTATED       51     52     24
  DEL PEAK 27(10P15.3) WILD-TYPE    119    221    129
D65V5, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           51                            119
  CLUS_2                           52                            221
  CLUS_3                           24                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10P15.3) MUTATED       33     23     18     42     11
  DEL PEAK 27(10P15.3) WILD-TYPE     98     93     80     79    119
D65V6, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           33                             98
  CLUS_2                           23                             93
  CLUS_3                           18                             80
  CLUS_4                           42                             79
  CLUS_5                           11                            119
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 27(10P15.3) MUTATED       47     56     27
  DEL PEAK 27(10P15.3) WILD-TYPE    120    222    145
D65V7, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           47                            120
  CLUS_2                           56                            222
  CLUS_3                           27                            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10P15.3) MUTATED       31     31     25     36      7
  DEL PEAK 27(10P15.3) WILD-TYPE     96    112    139     58     82
D65V8, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           31                             96
  CLUS_2                           31                            112
  CLUS_3                           25                            139
  CLUS_4                           36                             58
  CLUS_5                            7                             82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10P15.3) MUTATED       41     31     22     10      7
  DEL PEAK 27(10P15.3) WILD-TYPE     82    124     99     37     66
D65V9, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           41                             82
  CLUS_2                           31                            124
  CLUS_3                           22                             99
  CLUS_4                           10                             37
  CLUS_5                            7                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 27(10P15.3) MUTATED       15     24     20     16     36
  DEL PEAK 27(10P15.3) WILD-TYPE     36    100    124     92     56
D65V10, multiclass
        clus
vv       DEL PEAK 27(10P15.3) MUTATED DEL PEAK 27(10P15.3) WILD-TYPE
  CLUS_1                           15                             36
  CLUS_2                           24                            100
  CLUS_3                           20                            124
  CLUS_4                           16                             92
  CLUS_5                           36                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = DEL PEAK 28(10P11.21) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10P11.21) MUTATED       19     11     69      3
  DEL PEAK 28(10P11.21) WILD-TYPE    132     87    113    191
D66V1, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            19                             132
  CLUS_2                            11                              87
  CLUS_3                            69                             113
  CLUS_4                             3                             191
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10P11.21) MUTATED       23     54     20
  DEL PEAK 28(10P11.21) WILD-TYPE    218    107    155
D66V2, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            23                             218
  CLUS_2                            54                             107
  CLUS_3                            20                             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 28(10P11.21) MUTATED       22     20     26     11
  DEL PEAK 28(10P11.21) WILD-TYPE    123    117    110     53
D66V3, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            22                             123
  CLUS_2                            20                             117
  CLUS_3                            26                             110
  CLUS_4                            11                              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10P11.21) MUTATED       46     18     15
  DEL PEAK 28(10P11.21) WILD-TYPE    227     92     84
D66V4, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            46                             227
  CLUS_2                            18                              92
  CLUS_3                            15                              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10P11.21) MUTATED       51     30     17
  DEL PEAK 28(10P11.21) WILD-TYPE    119    243    136
D66V5, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            51                             119
  CLUS_2                            30                             243
  CLUS_3                            17                             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(10P11.21) MUTATED       27     11     10     43      7
  DEL PEAK 28(10P11.21) WILD-TYPE    104    105     88     78    123
D66V6, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            27                             104
  CLUS_2                            11                             105
  CLUS_3                            10                              88
  CLUS_4                            43                              78
  CLUS_5                             7                             123
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 28(10P11.21) MUTATED       45     37     18
  DEL PEAK 28(10P11.21) WILD-TYPE    122    241    154
D66V7, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            45                             122
  CLUS_2                            37                             241
  CLUS_3                            18                             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(10P11.21) MUTATED       25     18     14     40      3
  DEL PEAK 28(10P11.21) WILD-TYPE    102    125    150     54     86
D66V8, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            25                             102
  CLUS_2                            18                             125
  CLUS_3                            14                             150
  CLUS_4                            40                              54
  CLUS_5                             3                              86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(10P11.21) MUTATED       40     19     15      9      5
  DEL PEAK 28(10P11.21) WILD-TYPE     83    136    106     38     68
D66V9, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            40                              83
  CLUS_2                            19                             136
  CLUS_3                            15                             106
  CLUS_4                             9                              38
  CLUS_5                             5                              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 28(10P11.21) MUTATED       10     13     14     11     40
  DEL PEAK 28(10P11.21) WILD-TYPE     41    111    130     97     52
D66V10, multiclass
        clus
vv       DEL PEAK 28(10P11.21) MUTATED DEL PEAK 28(10P11.21) WILD-TYPE
  CLUS_1                            10                              41
  CLUS_2                            13                             111
  CLUS_3                            14                             130
  CLUS_4                            11                              97
  CLUS_5                            40                              52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = DEL PEAK 29(10Q22.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(10Q22.3) MUTATED       45     11     75      4
  DEL PEAK 29(10Q22.3) WILD-TYPE    106     87    107    190
D67V1, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           45                            106
  CLUS_2                           11                             87
  CLUS_3                           75                            107
  CLUS_4                            4                            190
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(10Q22.3) MUTATED       46     57     23
  DEL PEAK 29(10Q22.3) WILD-TYPE    195    104    152
D67V2, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           46                            195
  CLUS_2                           57                            104
  CLUS_3                           23                            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 29(10Q22.3) MUTATED       36     30     22     17
  DEL PEAK 29(10Q22.3) WILD-TYPE    109    107    114     47
D67V3, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           36                            109
  CLUS_2                           30                            107
  CLUS_3                           22                            114
  CLUS_4                           17                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(10Q22.3) MUTATED       63     27     15
  DEL PEAK 29(10Q22.3) WILD-TYPE    210     83     84
D67V4, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           63                            210
  CLUS_2                           27                             83
  CLUS_3                           15                             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(10Q22.3) MUTATED       48     67     16
  DEL PEAK 29(10Q22.3) WILD-TYPE    122    206    137
D67V5, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           48                            122
  CLUS_2                           67                            206
  CLUS_3                           16                            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(10Q22.3) MUTATED       37     19     23     43      9
  DEL PEAK 29(10Q22.3) WILD-TYPE     94     97     75     78    121
D67V6, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           37                             94
  CLUS_2                           19                             97
  CLUS_3                           23                             75
  CLUS_4                           43                             78
  CLUS_5                            9                            121
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 29(10Q22.3) MUTATED       50     63     21
  DEL PEAK 29(10Q22.3) WILD-TYPE    117    215    151
D67V7, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           50                            117
  CLUS_2                           63                            215
  CLUS_3                           21                            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(10Q22.3) MUTATED       40     37     16     36      5
  DEL PEAK 29(10Q22.3) WILD-TYPE     87    106    148     58     84
D67V8, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           40                             87
  CLUS_2                           37                            106
  CLUS_3                           16                            148
  CLUS_4                           36                             58
  CLUS_5                            5                             84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(10Q22.3) MUTATED       43     30     20      9      9
  DEL PEAK 29(10Q22.3) WILD-TYPE     80    125    101     38     64
D67V9, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           43                             80
  CLUS_2                           30                            125
  CLUS_3                           20                            101
  CLUS_4                            9                             38
  CLUS_5                            9                             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 29(10Q22.3) MUTATED       15     32     14     14     36
  DEL PEAK 29(10Q22.3) WILD-TYPE     36     92    130     94     56
D67V10, multiclass
        clus
vv       DEL PEAK 29(10Q22.3) MUTATED DEL PEAK 29(10Q22.3) WILD-TYPE
  CLUS_1                           15                             36
  CLUS_2                           32                             92
  CLUS_3                           14                            130
  CLUS_4                           14                             94
  CLUS_5                           36                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = DEL PEAK 30(10Q23.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(10Q23.31) MUTATED       54     26     93     10
  DEL PEAK 30(10Q23.31) WILD-TYPE     97     72     89    184
D68V1, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            54                              97
  CLUS_2                            26                              72
  CLUS_3                            93                              89
  CLUS_4                            10                             184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(10Q23.31) MUTATED       63     72     34
  DEL PEAK 30(10Q23.31) WILD-TYPE    178     89    141
D68V2, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            63                             178
  CLUS_2                            72                              89
  CLUS_3                            34                             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 30(10Q23.31) MUTATED       53     37     28     25
  DEL PEAK 30(10Q23.31) WILD-TYPE     92    100    108     39
D68V3, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            53                              92
  CLUS_2                            37                             100
  CLUS_3                            28                             108
  CLUS_4                            25                              39
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(10Q23.31) MUTATED       92     30     21
  DEL PEAK 30(10Q23.31) WILD-TYPE    181     80     78
D68V4, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            92                             181
  CLUS_2                            30                              80
  CLUS_3                            21                              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(10Q23.31) MUTATED       61     92     22
  DEL PEAK 30(10Q23.31) WILD-TYPE    109    181    131
D68V5, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            61                             109
  CLUS_2                            92                             181
  CLUS_3                            22                             131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(10Q23.31) MUTATED       56     30     29     46     14
  DEL PEAK 30(10Q23.31) WILD-TYPE     75     86     69     75    116
D68V6, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            56                              75
  CLUS_2                            30                              86
  CLUS_3                            29                              69
  CLUS_4                            46                              75
  CLUS_5                            14                             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 30(10Q23.31) MUTATED       62     89     30
  DEL PEAK 30(10Q23.31) WILD-TYPE    105    189    142
D68V7, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            62                             105
  CLUS_2                            89                             189
  CLUS_3                            30                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(10Q23.31) MUTATED       56     45     31     40      9
  DEL PEAK 30(10Q23.31) WILD-TYPE     71     98    133     54     80
D68V8, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            56                              71
  CLUS_2                            45                              98
  CLUS_3                            31                             133
  CLUS_4                            40                              54
  CLUS_5                             9                              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(10Q23.31) MUTATED       52     48     26     13     14
  DEL PEAK 30(10Q23.31) WILD-TYPE     71    107     95     34     59
D68V9, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            52                              71
  CLUS_2                            48                             107
  CLUS_3                            26                              95
  CLUS_4                            13                              34
  CLUS_5                            14                              59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 30(10Q23.31) MUTATED       22     42     29     20     40
  DEL PEAK 30(10Q23.31) WILD-TYPE     29     82    115     88     52
D68V10, multiclass
        clus
vv       DEL PEAK 30(10Q23.31) MUTATED DEL PEAK 30(10Q23.31) WILD-TYPE
  CLUS_1                            22                              29
  CLUS_2                            42                              82
  CLUS_3                            29                             115
  CLUS_4                            20                              88
  CLUS_5                            40                              52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = DEL PEAK 31(11P15.5) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11P15.5) MUTATED       51     32     81     11
  DEL PEAK 31(11P15.5) WILD-TYPE    100     66    101    183
D69V1, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           51                            100
  CLUS_2                           32                             66
  CLUS_3                           81                            101
  CLUS_4                           11                            183
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11P15.5) MUTATED       63     70     28
  DEL PEAK 31(11P15.5) WILD-TYPE    178     91    147
D69V2, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           63                            178
  CLUS_2                           70                             91
  CLUS_3                           28                            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 31(11P15.5) MUTATED       52     31     30     23
  DEL PEAK 31(11P15.5) WILD-TYPE     93    106    106     41
D69V3, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           52                             93
  CLUS_2                           31                            106
  CLUS_3                           30                            106
  CLUS_4                           23                             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11P15.5) MUTATED       93     23     20
  DEL PEAK 31(11P15.5) WILD-TYPE    180     87     79
D69V4, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           93                            180
  CLUS_2                           23                             87
  CLUS_3                           20                             79
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11P15.5) MUTATED       70     71     24
  DEL PEAK 31(11P15.5) WILD-TYPE    100    202    129
D69V5, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           70                            100
  CLUS_2                           71                            202
  CLUS_3                           24                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(11P15.5) MUTATED       54     29     14     52     16
  DEL PEAK 31(11P15.5) WILD-TYPE     77     87     84     69    114
D69V6, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           54                             77
  CLUS_2                           29                             87
  CLUS_3                           14                             84
  CLUS_4                           52                             69
  CLUS_5                           16                            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 31(11P15.5) MUTATED       72     64     36
  DEL PEAK 31(11P15.5) WILD-TYPE     95    214    136
D69V7, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           72                             95
  CLUS_2                           64                            214
  CLUS_3                           36                            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(11P15.5) MUTATED       46     41     29     43     13
  DEL PEAK 31(11P15.5) WILD-TYPE     81    102    135     51     76
D69V8, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           46                             81
  CLUS_2                           41                            102
  CLUS_3                           29                            135
  CLUS_4                           43                             51
  CLUS_5                           13                             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(11P15.5) MUTATED       52     40     23     14     17
  DEL PEAK 31(11P15.5) WILD-TYPE     71    115     98     33     56
D69V9, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           52                             71
  CLUS_2                           40                            115
  CLUS_3                           23                             98
  CLUS_4                           14                             33
  CLUS_5                           17                             56
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 31(11P15.5) MUTATED       14     38     30     22     42
  DEL PEAK 31(11P15.5) WILD-TYPE     37     86    114     86     50
D69V10, multiclass
        clus
vv       DEL PEAK 31(11P15.5) MUTATED DEL PEAK 31(11P15.5) WILD-TYPE
  CLUS_1                           14                             37
  CLUS_2                           38                             86
  CLUS_3                           30                            114
  CLUS_4                           22                             86
  CLUS_5                           42                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = DEL PEAK 32(11Q25) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(11Q25) MUTATED       46     31     91     10
  DEL PEAK 32(11Q25) WILD-TYPE    105     67     91    184
D70V1, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         46                          105
  CLUS_2                         31                           67
  CLUS_3                         91                           91
  CLUS_4                         10                          184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(11Q25) MUTATED       65     75     30
  DEL PEAK 32(11Q25) WILD-TYPE    176     86    145
D70V2, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         65                          176
  CLUS_2                         75                           86
  CLUS_3                         30                          145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 32(11Q25) MUTATED       31     45     39     15
  DEL PEAK 32(11Q25) WILD-TYPE    114     92     97     49
D70V3, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         31                          114
  CLUS_2                         45                           92
  CLUS_3                         39                           97
  CLUS_4                         15                           49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(11Q25) MUTATED       72     36     22
  DEL PEAK 32(11Q25) WILD-TYPE    201     74     77
D70V4, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         72                          201
  CLUS_2                         36                           74
  CLUS_3                         22                           77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(11Q25) MUTATED       67     77     26
  DEL PEAK 32(11Q25) WILD-TYPE    103    196    127
D70V5, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         67                          103
  CLUS_2                         77                          196
  CLUS_3                         26                          127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(11Q25) MUTATED       50     30     19     55     16
  DEL PEAK 32(11Q25) WILD-TYPE     81     86     79     66    114
D70V6, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         50                           81
  CLUS_2                         30                           86
  CLUS_3                         19                           79
  CLUS_4                         55                           66
  CLUS_5                         16                          114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 32(11Q25) MUTATED       73     66     37
  DEL PEAK 32(11Q25) WILD-TYPE     94    212    135
D70V7, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         73                           94
  CLUS_2                         66                          212
  CLUS_3                         37                          135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(11Q25) MUTATED       40     39     32     51     14
  DEL PEAK 32(11Q25) WILD-TYPE     87    104    132     43     75
D70V8, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         40                           87
  CLUS_2                         39                          104
  CLUS_3                         32                          132
  CLUS_4                         51                           43
  CLUS_5                         14                           75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(11Q25) MUTATED       60     41     32      8     14
  DEL PEAK 32(11Q25) WILD-TYPE     63    114     89     39     59
D70V9, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         60                           63
  CLUS_2                         41                          114
  CLUS_3                         32                           89
  CLUS_4                          8                           39
  CLUS_5                         14                           59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 32(11Q25) MUTATED       15     39     30     21     50
  DEL PEAK 32(11Q25) WILD-TYPE     36     85    114     87     42
D70V10, multiclass
        clus
vv       DEL PEAK 32(11Q25) MUTATED DEL PEAK 32(11Q25) WILD-TYPE
  CLUS_1                         15                           36
  CLUS_2                         39                           85
  CLUS_3                         30                          114
  CLUS_4                         21                           87
  CLUS_5                         50                           42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = DEL PEAK 33(12P13.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(12P13.1) MUTATED       60     20     27      6
  DEL PEAK 33(12P13.1) WILD-TYPE     91     78    155    188
D71V1, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           60                             91
  CLUS_2                           20                             78
  CLUS_3                           27                            155
  CLUS_4                            6                            188
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(12P13.1) MUTATED       52     34     19
  DEL PEAK 33(12P13.1) WILD-TYPE    189    127    156
D71V2, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           52                            189
  CLUS_2                           34                            127
  CLUS_3                           19                            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 33(12P13.1) MUTATED       30     20     23     15
  DEL PEAK 33(12P13.1) WILD-TYPE    115    117    113     49
D71V3, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           30                            115
  CLUS_2                           20                            117
  CLUS_3                           23                            113
  CLUS_4                           15                             49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(12P13.1) MUTATED       52     17     19
  DEL PEAK 33(12P13.1) WILD-TYPE    221     93     80
D71V4, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           52                            221
  CLUS_2                           17                             93
  CLUS_3                           19                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(12P13.1) MUTATED       33     55     20
  DEL PEAK 33(12P13.1) WILD-TYPE    137    218    133
D71V5, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           33                            137
  CLUS_2                           55                            218
  CLUS_3                           20                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(12P13.1) MUTATED       48     20     12     15     13
  DEL PEAK 33(12P13.1) WILD-TYPE     83     96     86    106    117
D71V6, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           48                             83
  CLUS_2                           20                             96
  CLUS_3                           12                             86
  CLUS_4                           15                            106
  CLUS_5                           13                            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 33(12P13.1) MUTATED       35     50     27
  DEL PEAK 33(12P13.1) WILD-TYPE    132    228    145
D71V7, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           35                            132
  CLUS_2                           50                            228
  CLUS_3                           27                            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(12P13.1) MUTATED       44     28     21      7     12
  DEL PEAK 33(12P13.1) WILD-TYPE     83    115    143     87     77
D71V8, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           44                             83
  CLUS_2                           28                            115
  CLUS_3                           21                            143
  CLUS_4                            7                             87
  CLUS_5                           12                             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(12P13.1) MUTATED       27     36     19      8     11
  DEL PEAK 33(12P13.1) WILD-TYPE     96    119    102     39     62
D71V9, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           27                             96
  CLUS_2                           36                            119
  CLUS_3                           19                            102
  CLUS_4                            8                             39
  CLUS_5                           11                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 33(12P13.1) MUTATED       21     26     27     20      7
  DEL PEAK 33(12P13.1) WILD-TYPE     30     98    117     88     85
D71V10, multiclass
        clus
vv       DEL PEAK 33(12P13.1) MUTATED DEL PEAK 33(12P13.1) WILD-TYPE
  CLUS_1                           21                             30
  CLUS_2                           26                             98
  CLUS_3                           27                            117
  CLUS_4                           20                             88
  CLUS_5                            7                             85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = DEL PEAK 34(12Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(12Q23.1) MUTATED       42     18     45      5
  DEL PEAK 34(12Q23.1) WILD-TYPE    109     80    137    189
D72V1, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           42                            109
  CLUS_2                           18                             80
  CLUS_3                           45                            137
  CLUS_4                            5                            189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(12Q23.1) MUTATED       45     41     18
  DEL PEAK 34(12Q23.1) WILD-TYPE    196    120    157
D72V2, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           45                            196
  CLUS_2                           41                            120
  CLUS_3                           18                            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 34(12Q23.1) MUTATED       22     22     21     17
  DEL PEAK 34(12Q23.1) WILD-TYPE    123    115    115     47
D72V3, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           22                            123
  CLUS_2                           22                            115
  CLUS_3                           21                            115
  CLUS_4                           17                             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(12Q23.1) MUTATED       51     17     14
  DEL PEAK 34(12Q23.1) WILD-TYPE    222     93     85
D72V4, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           51                            222
  CLUS_2                           17                             93
  CLUS_3                           14                             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(12Q23.1) MUTATED       40     52     12
  DEL PEAK 34(12Q23.1) WILD-TYPE    130    221    141
D72V5, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           40                            130
  CLUS_2                           52                            221
  CLUS_3                           12                            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(12Q23.1) MUTATED       37     21     12     28      6
  DEL PEAK 34(12Q23.1) WILD-TYPE     94     95     86     93    124
D72V6, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           37                             94
  CLUS_2                           21                             95
  CLUS_3                           12                             86
  CLUS_4                           28                             93
  CLUS_5                            6                            124
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 34(12Q23.1) MUTATED       37     50     21
  DEL PEAK 34(12Q23.1) WILD-TYPE    130    228    151
D72V7, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           37                            130
  CLUS_2                           50                            228
  CLUS_3                           21                            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(12Q23.1) MUTATED       33     31     16     20      8
  DEL PEAK 34(12Q23.1) WILD-TYPE     94    112    148     74     81
D72V8, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           33                             94
  CLUS_2                           31                            112
  CLUS_3                           16                            148
  CLUS_4                           20                             74
  CLUS_5                            8                             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(12Q23.1) MUTATED       30     36     19      8      5
  DEL PEAK 34(12Q23.1) WILD-TYPE     93    119    102     39     68
D72V9, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           30                             93
  CLUS_2                           36                            119
  CLUS_3                           19                            102
  CLUS_4                            8                             39
  CLUS_5                            5                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 34(12Q23.1) MUTATED       11     30     21     15     21
  DEL PEAK 34(12Q23.1) WILD-TYPE     40     94    123     93     71
D72V10, multiclass
        clus
vv       DEL PEAK 34(12Q23.1) MUTATED DEL PEAK 34(12Q23.1) WILD-TYPE
  CLUS_1                           11                             40
  CLUS_2                           30                             94
  CLUS_3                           21                            123
  CLUS_4                           15                             93
  CLUS_5                           21                             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = DEL PEAK 35(13Q12.11) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(13Q12.11) MUTATED       14     48     67      9
  DEL PEAK 35(13Q12.11) WILD-TYPE    137     50    115    185
D73V1, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            14                             137
  CLUS_2                            48                              50
  CLUS_3                            67                             115
  CLUS_4                             9                             185
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q12.11) MUTATED       48     60     23
  DEL PEAK 35(13Q12.11) WILD-TYPE    193    101    152
D73V2, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            48                             193
  CLUS_2                            60                             101
  CLUS_3                            23                             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 35(13Q12.11) MUTATED       37     25     32     12
  DEL PEAK 35(13Q12.11) WILD-TYPE    108    112    104     52
D73V3, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            37                             108
  CLUS_2                            25                             112
  CLUS_3                            32                             104
  CLUS_4                            12                              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q12.11) MUTATED       68     17     21
  DEL PEAK 35(13Q12.11) WILD-TYPE    205     93     78
D73V4, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            68                             205
  CLUS_2                            17                              93
  CLUS_3                            21                              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q12.11) MUTATED       64     49     21
  DEL PEAK 35(13Q12.11) WILD-TYPE    106    224    132
D73V5, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            64                             106
  CLUS_2                            49                             224
  CLUS_3                            21                             132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(13Q12.11) MUTATED       34     24     11     52     13
  DEL PEAK 35(13Q12.11) WILD-TYPE     97     92     87     69    117
D73V6, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            34                              97
  CLUS_2                            24                              92
  CLUS_3                            11                              87
  CLUS_4                            52                              69
  CLUS_5                            13                             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 35(13Q12.11) MUTATED       63     45     30
  DEL PEAK 35(13Q12.11) WILD-TYPE    104    233    142
D73V7, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            63                             104
  CLUS_2                            45                             233
  CLUS_3                            30                             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(13Q12.11) MUTATED       30     25     24     50      9
  DEL PEAK 35(13Q12.11) WILD-TYPE     97    118    140     44     80
D73V8, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            30                              97
  CLUS_2                            25                             118
  CLUS_3                            24                             140
  CLUS_4                            50                              44
  CLUS_5                             9                              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(13Q12.11) MUTATED       49     31     24     10      9
  DEL PEAK 35(13Q12.11) WILD-TYPE     74    124     97     37     64
D73V9, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                            49                              74
  CLUS_2                            31                             124
  CLUS_3                            24                              97
  CLUS_4                            10                              37
  CLUS_5                             9                              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 35(13Q12.11) MUTATED        8     28     24     14     49
  DEL PEAK 35(13Q12.11) WILD-TYPE     43     96    120     94     43
D73V10, multiclass
        clus
vv       DEL PEAK 35(13Q12.11) MUTATED DEL PEAK 35(13Q12.11) WILD-TYPE
  CLUS_1                             8                              43
  CLUS_2                            28                              96
  CLUS_3                            24                             120
  CLUS_4                            14                              94
  CLUS_5                            49                              43
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = DEL PEAK 36(13Q21.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(13Q21.31) MUTATED        4     47     65     10
  DEL PEAK 36(13Q21.31) WILD-TYPE    147     51    117    184
D74V1, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                             4                             147
  CLUS_2                            47                              51
  CLUS_3                            65                             117
  CLUS_4                            10                             184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(13Q21.31) MUTATED       43     53     21
  DEL PEAK 36(13Q21.31) WILD-TYPE    198    108    154
D74V2, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            43                             198
  CLUS_2                            53                             108
  CLUS_3                            21                             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 36(13Q21.31) MUTATED       37     26     22     14
  DEL PEAK 36(13Q21.31) WILD-TYPE    108    111    114     50
D74V3, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            37                             108
  CLUS_2                            26                             111
  CLUS_3                            22                             114
  CLUS_4                            14                              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(13Q21.31) MUTATED       65     18     16
  DEL PEAK 36(13Q21.31) WILD-TYPE    208     92     83
D74V4, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            65                             208
  CLUS_2                            18                              92
  CLUS_3                            16                              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(13Q21.31) MUTATED       58     46     18
  DEL PEAK 36(13Q21.31) WILD-TYPE    112    227    135
D74V5, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            58                             112
  CLUS_2                            46                             227
  CLUS_3                            18                             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(13Q21.31) MUTATED       25     27      9     49     12
  DEL PEAK 36(13Q21.31) WILD-TYPE    106     89     89     72    118
D74V6, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            25                             106
  CLUS_2                            27                              89
  CLUS_3                             9                              89
  CLUS_4                            49                              72
  CLUS_5                            12                             118
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 36(13Q21.31) MUTATED       53     48     25
  DEL PEAK 36(13Q21.31) WILD-TYPE    114    230    147
D74V7, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            53                             114
  CLUS_2                            48                             230
  CLUS_3                            25                             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(13Q21.31) MUTATED       27     21     28     44      6
  DEL PEAK 36(13Q21.31) WILD-TYPE    100    122    136     50     83
D74V8, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            27                             100
  CLUS_2                            21                             122
  CLUS_3                            28                             136
  CLUS_4                            44                              50
  CLUS_5                             6                              83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(13Q21.31) MUTATED       42     26     21     12      8
  DEL PEAK 36(13Q21.31) WILD-TYPE     81    129    100     35     65
D74V9, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                            42                              81
  CLUS_2                            26                             129
  CLUS_3                            21                             100
  CLUS_4                            12                              35
  CLUS_5                             8                              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 36(13Q21.31) MUTATED        6     28     21     11     43
  DEL PEAK 36(13Q21.31) WILD-TYPE     45     96    123     97     49
D74V10, multiclass
        clus
vv       DEL PEAK 36(13Q21.31) MUTATED DEL PEAK 36(13Q21.31) WILD-TYPE
  CLUS_1                             6                              45
  CLUS_2                            28                              96
  CLUS_3                            21                             123
  CLUS_4                            11                              97
  CLUS_5                            43                              49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = DEL PEAK 37(14Q23.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(14Q23.3) MUTATED       71     54     49     13
  DEL PEAK 37(14Q23.3) WILD-TYPE     80     44    133    181
D75V1, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           71                             80
  CLUS_2                           54                             44
  CLUS_3                           49                            133
  CLUS_4                           13                            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(14Q23.3) MUTATED       71     64     39
  DEL PEAK 37(14Q23.3) WILD-TYPE    170     97    136
D75V2, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           71                            170
  CLUS_2                           64                             97
  CLUS_3                           39                            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 37(14Q23.3) MUTATED       45     46     39     16
  DEL PEAK 37(14Q23.3) WILD-TYPE    100     91     97     48
D75V3, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           45                            100
  CLUS_2                           46                             91
  CLUS_3                           39                             97
  CLUS_4                           16                             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(14Q23.3) MUTATED       79     42     25
  DEL PEAK 37(14Q23.3) WILD-TYPE    194     68     74
D75V4, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           79                            194
  CLUS_2                           42                             68
  CLUS_3                           25                             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(14Q23.3) MUTATED       44     96     37
  DEL PEAK 37(14Q23.3) WILD-TYPE    126    177    116
D75V5, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           44                            126
  CLUS_2                           96                            177
  CLUS_3                           37                            116
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(14Q23.3) MUTATED       69     42     18     23     25
  DEL PEAK 37(14Q23.3) WILD-TYPE     62     74     80     98    105
D75V6, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           69                             62
  CLUS_2                           42                             74
  CLUS_3                           18                             80
  CLUS_4                           23                             98
  CLUS_5                           25                            105
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 37(14Q23.3) MUTATED       52     87     44
  DEL PEAK 37(14Q23.3) WILD-TYPE    115    191    128
D75V7, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           52                            115
  CLUS_2                           87                            191
  CLUS_3                           44                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(14Q23.3) MUTATED       69     44     34     19     17
  DEL PEAK 37(14Q23.3) WILD-TYPE     58     99    130     75     72
D75V8, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           69                             58
  CLUS_2                           44                             99
  CLUS_3                           34                            130
  CLUS_4                           19                             75
  CLUS_5                           17                             72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(14Q23.3) MUTATED       41     56     29     13     15
  DEL PEAK 37(14Q23.3) WILD-TYPE     82     99     92     34     58
D75V9, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           41                             82
  CLUS_2                           56                             99
  CLUS_3                           29                             92
  CLUS_4                           13                             34
  CLUS_5                           15                             58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 37(14Q23.3) MUTATED       30     45     37     23     19
  DEL PEAK 37(14Q23.3) WILD-TYPE     21     79    107     85     73
D75V10, multiclass
        clus
vv       DEL PEAK 37(14Q23.3) MUTATED DEL PEAK 37(14Q23.3) WILD-TYPE
  CLUS_1                           30                             21
  CLUS_2                           45                             79
  CLUS_3                           37                            107
  CLUS_4                           23                             85
  CLUS_5                           19                             73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = DEL PEAK 38(15Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(15Q11.2) MUTATED       68     38     70      7
  DEL PEAK 38(15Q11.2) WILD-TYPE     83     60    112    187
D76V1, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           68                             83
  CLUS_2                           38                             60
  CLUS_3                           70                            112
  CLUS_4                            7                            187
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(15Q11.2) MUTATED       73     61     39
  DEL PEAK 38(15Q11.2) WILD-TYPE    168    100    136
D76V2, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           73                            168
  CLUS_2                           61                            100
  CLUS_3                           39                            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 38(15Q11.2) MUTATED       54     34     30     18
  DEL PEAK 38(15Q11.2) WILD-TYPE     91    103    106     46
D76V3, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           54                             91
  CLUS_2                           34                            103
  CLUS_3                           30                            106
  CLUS_4                           18                             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(15Q11.2) MUTATED       90     25     21
  DEL PEAK 38(15Q11.2) WILD-TYPE    183     85     78
D76V4, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           90                            183
  CLUS_2                           25                             85
  CLUS_3                           21                             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(15Q11.2) MUTATED       51     96     30
  DEL PEAK 38(15Q11.2) WILD-TYPE    119    177    123
D76V5, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           51                            119
  CLUS_2                           96                            177
  CLUS_3                           30                            123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(15Q11.2) MUTATED       55     40     29     36     17
  DEL PEAK 38(15Q11.2) WILD-TYPE     76     76     69     85    113
D76V6, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           55                             76
  CLUS_2                           40                             76
  CLUS_3                           29                             69
  CLUS_4                           36                             85
  CLUS_5                           17                            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 38(15Q11.2) MUTATED       54     90     37
  DEL PEAK 38(15Q11.2) WILD-TYPE    113    188    135
D76V7, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           54                            113
  CLUS_2                           90                            188
  CLUS_3                           37                            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(15Q11.2) MUTATED       59     46     34     29     13
  DEL PEAK 38(15Q11.2) WILD-TYPE     68     97    130     65     76
D76V8, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           59                             68
  CLUS_2                           46                             97
  CLUS_3                           34                            130
  CLUS_4                           29                             65
  CLUS_5                           13                             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(15Q11.2) MUTATED       43     57     29      9     19
  DEL PEAK 38(15Q11.2) WILD-TYPE     80     98     92     38     54
D76V9, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           43                             80
  CLUS_2                           57                             98
  CLUS_3                           29                             92
  CLUS_4                            9                             38
  CLUS_5                           19                             54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 38(15Q11.2) MUTATED       19     41     42     26     29
  DEL PEAK 38(15Q11.2) WILD-TYPE     32     83    102     82     63
D76V10, multiclass
        clus
vv       DEL PEAK 38(15Q11.2) MUTATED DEL PEAK 38(15Q11.2) WILD-TYPE
  CLUS_1                           19                             32
  CLUS_2                           41                             83
  CLUS_3                           42                            102
  CLUS_4                           26                             82
  CLUS_5                           29                             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = DEL PEAK 39(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16P13.3) MUTATED       84     38     47      8
  DEL PEAK 39(16P13.3) WILD-TYPE     67     60    135    186
D77V1, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           84                             67
  CLUS_2                           38                             60
  CLUS_3                           47                            135
  CLUS_4                            8                            186
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16P13.3) MUTATED       73     60     33
  DEL PEAK 39(16P13.3) WILD-TYPE    168    101    142
D77V2, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           73                            168
  CLUS_2                           60                            101
  CLUS_3                           33                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 39(16P13.3) MUTATED       46     37     30     13
  DEL PEAK 39(16P13.3) WILD-TYPE     99    100    106     51
D77V3, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           46                             99
  CLUS_2                           37                            100
  CLUS_3                           30                            106
  CLUS_4                           13                             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16P13.3) MUTATED       79     28     19
  DEL PEAK 39(16P13.3) WILD-TYPE    194     82     80
D77V4, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           79                            194
  CLUS_2                           28                             82
  CLUS_3                           19                             80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16P13.3) MUTATED       60     86     24
  DEL PEAK 39(16P13.3) WILD-TYPE    110    187    129
D77V5, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           60                            110
  CLUS_2                           86                            187
  CLUS_3                           24                            129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(16P13.3) MUTATED       70     34     19     31     16
  DEL PEAK 39(16P13.3) WILD-TYPE     61     82     79     90    114
D77V6, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           70                             61
  CLUS_2                           34                             82
  CLUS_3                           19                             79
  CLUS_4                           31                             90
  CLUS_5                           16                            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 39(16P13.3) MUTATED       63     79     33
  DEL PEAK 39(16P13.3) WILD-TYPE    104    199    139
D77V7, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           63                            104
  CLUS_2                           79                            199
  CLUS_3                           33                            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(16P13.3) MUTATED       65     56     25     18     11
  DEL PEAK 39(16P13.3) WILD-TYPE     62     87    139     76     78
D77V8, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           65                             62
  CLUS_2                           56                             87
  CLUS_3                           25                            139
  CLUS_4                           18                             76
  CLUS_5                           11                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(16P13.3) MUTATED       50     54     21     16     11
  DEL PEAK 39(16P13.3) WILD-TYPE     73    101    100     31     62
D77V9, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           50                             73
  CLUS_2                           54                            101
  CLUS_3                           21                            100
  CLUS_4                           16                             31
  CLUS_5                           11                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 39(16P13.3) MUTATED       32     46     32     24     18
  DEL PEAK 39(16P13.3) WILD-TYPE     19     78    112     84     74
D77V10, multiclass
        clus
vv       DEL PEAK 39(16P13.3) MUTATED DEL PEAK 39(16P13.3) WILD-TYPE
  CLUS_1                           32                             19
  CLUS_2                           46                             78
  CLUS_3                           32                            112
  CLUS_4                           24                             84
  CLUS_5                           18                             74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DEL PEAK 40(16P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(16P13.3) MUTATED       71     36     41      5
  DEL PEAK 40(16P13.3) WILD-TYPE     80     62    141    189
D78V1, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           71                             80
  CLUS_2                           36                             62
  CLUS_3                           41                            141
  CLUS_4                            5                            189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(16P13.3) MUTATED       60     55     29
  DEL PEAK 40(16P13.3) WILD-TYPE    181    106    146
D78V2, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           60                            181
  CLUS_2                           55                            106
  CLUS_3                           29                            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 40(16P13.3) MUTATED       38     35     28      9
  DEL PEAK 40(16P13.3) WILD-TYPE    107    102    108     55
D78V3, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           38                            107
  CLUS_2                           35                            102
  CLUS_3                           28                            108
  CLUS_4                            9                             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(16P13.3) MUTATED       65     27     18
  DEL PEAK 40(16P13.3) WILD-TYPE    208     83     81
D78V4, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           65                            208
  CLUS_2                           27                             83
  CLUS_3                           18                             81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(16P13.3) MUTATED       49     74     22
  DEL PEAK 40(16P13.3) WILD-TYPE    121    199    131
D78V5, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           49                            121
  CLUS_2                           74                            199
  CLUS_3                           22                            131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(16P13.3) MUTATED       65     30     14     23     13
  DEL PEAK 40(16P13.3) WILD-TYPE     66     86     84     98    117
D78V6, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           65                             66
  CLUS_2                           30                             86
  CLUS_3                           14                             84
  CLUS_4                           23                             98
  CLUS_5                           13                            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 40(16P13.3) MUTATED       59     64     28
  DEL PEAK 40(16P13.3) WILD-TYPE    108    214    144
D78V7, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           59                            108
  CLUS_2                           64                            214
  CLUS_3                           28                            144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(16P13.3) MUTATED       63     45     17     15     11
  DEL PEAK 40(16P13.3) WILD-TYPE     64     98    147     79     78
D78V8, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           63                             64
  CLUS_2                           45                             98
  CLUS_3                           17                            147
  CLUS_4                           15                             79
  CLUS_5                           11                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(16P13.3) MUTATED       47     46     18     13      7
  DEL PEAK 40(16P13.3) WILD-TYPE     76    109    103     34     66
D78V9, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           47                             76
  CLUS_2                           46                            109
  CLUS_3                           18                            103
  CLUS_4                           13                             34
  CLUS_5                            7                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 40(16P13.3) MUTATED       30     41     24     21     15
  DEL PEAK 40(16P13.3) WILD-TYPE     21     83    120     87     77
D78V10, multiclass
        clus
vv       DEL PEAK 40(16P13.3) MUTATED DEL PEAK 40(16P13.3) WILD-TYPE
  CLUS_1                           30                             21
  CLUS_2                           41                             83
  CLUS_3                           24                            120
  CLUS_4                           21                             87
  CLUS_5                           15                             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = DEL PEAK 41(16Q23.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(16Q23.1) MUTATED       99     60     68     38
  DEL PEAK 41(16Q23.1) WILD-TYPE     52     38    114    156
D79V1, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           99                             52
  CLUS_2                           60                             38
  CLUS_3                           68                            114
  CLUS_4                           38                            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(16Q23.1) MUTATED      121     69     55
  DEL PEAK 41(16Q23.1) WILD-TYPE    120     92    120
D79V2, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                          121                            120
  CLUS_2                           69                             92
  CLUS_3                           55                            120
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 41(16Q23.1) MUTATED       61     57     54     27
  DEL PEAK 41(16Q23.1) WILD-TYPE     84     80     82     37
D79V3, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           61                             84
  CLUS_2                           57                             80
  CLUS_3                           54                             82
  CLUS_4                           27                             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(16Q23.1) MUTATED      115     51     33
  DEL PEAK 41(16Q23.1) WILD-TYPE    158     59     66
D79V4, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                          115                            158
  CLUS_2                           51                             59
  CLUS_3                           33                             66
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(16Q23.1) MUTATED       70    129     53
  DEL PEAK 41(16Q23.1) WILD-TYPE    100    144    100
D79V5, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           70                            100
  CLUS_2                          129                            144
  CLUS_3                           53                            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(16Q23.1) MUTATED       80     54     35     37     46
  DEL PEAK 41(16Q23.1) WILD-TYPE     51     62     63     84     84
D79V6, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           80                             51
  CLUS_2                           54                             62
  CLUS_3                           35                             63
  CLUS_4                           37                             84
  CLUS_5                           46                             84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 41(16Q23.1) MUTATED       72    132     57
  DEL PEAK 41(16Q23.1) WILD-TYPE     95    146    115
D79V7, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           72                             95
  CLUS_2                          132                            146
  CLUS_3                           57                            115
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(16Q23.1) MUTATED       73     75     65     21     27
  DEL PEAK 41(16Q23.1) WILD-TYPE     54     68     99     73     62
D79V8, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           73                             54
  CLUS_2                           75                             68
  CLUS_3                           65                             99
  CLUS_4                           21                             73
  CLUS_5                           27                             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(16Q23.1) MUTATED       52     81     38     23     24
  DEL PEAK 41(16Q23.1) WILD-TYPE     71     74     83     24     49
D79V9, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           52                             71
  CLUS_2                           81                             74
  CLUS_3                           38                             83
  CLUS_4                           23                             24
  CLUS_5                           24                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 41(16Q23.1) MUTATED       34     66     57     40     21
  DEL PEAK 41(16Q23.1) WILD-TYPE     17     58     87     68     71
D79V10, multiclass
        clus
vv       DEL PEAK 41(16Q23.1) MUTATED DEL PEAK 41(16Q23.1) WILD-TYPE
  CLUS_1                           34                             17
  CLUS_2                           66                             58
  CLUS_3                           57                             87
  CLUS_4                           40                             68
  CLUS_5                           21                             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = DEL PEAK 42(17P12) MUTATION ANALYSIS
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17P12) MUTATED      103     66     88     10
  DEL PEAK 42(17P12) WILD-TYPE     48     32     94    184
D80V1, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                        103                           48
  CLUS_2                         66                           32
  CLUS_3                         88                           94
  CLUS_4                         10                          184
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17P12) MUTATED      120     85     46
  DEL PEAK 42(17P12) WILD-TYPE    121     76    129
D80V2, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                        120                          121
  CLUS_2                         85                           76
  CLUS_3                         46                          129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 42(17P12) MUTATED       62     56     47     32
  DEL PEAK 42(17P12) WILD-TYPE     83     81     89     32
D80V3, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         62                           83
  CLUS_2                         56                           81
  CLUS_3                         47                           89
  CLUS_4                         32                           32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17P12) MUTATED      119     46     32
  DEL PEAK 42(17P12) WILD-TYPE    154     64     67
D80V4, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                        119                          154
  CLUS_2                         46                           64
  CLUS_3                         32                           67
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17P12) MUTATED       72    137     45
  DEL PEAK 42(17P12) WILD-TYPE     98    136    108
D80V5, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         72                           98
  CLUS_2                        137                          136
  CLUS_3                         45                          108
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(17P12) MUTATED       90     59     38     43     24
  DEL PEAK 42(17P12) WILD-TYPE     41     57     60     78    106
D80V6, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         90                           41
  CLUS_2                         59                           57
  CLUS_3                         38                           60
  CLUS_4                         43                           78
  CLUS_5                         24                          106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 42(17P12) MUTATED       79    134     49
  DEL PEAK 42(17P12) WILD-TYPE     88    144    123
D80V7, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         79                           88
  CLUS_2                        134                          144
  CLUS_3                         49                          123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(17P12) MUTATED       87     74     55     27     19
  DEL PEAK 42(17P12) WILD-TYPE     40     69    109     67     70
D80V8, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         87                           40
  CLUS_2                         74                           69
  CLUS_3                         55                          109
  CLUS_4                         27                           67
  CLUS_5                         19                           70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(17P12) MUTATED       58     81     42     16     28
  DEL PEAK 42(17P12) WILD-TYPE     65     74     79     31     45
D80V9, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         58                           65
  CLUS_2                         81                           74
  CLUS_3                         42                           79
  CLUS_4                         16                           31
  CLUS_5                         28                           45
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                              vv
clus                           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 42(17P12) MUTATED       36     70     56     35     28
  DEL PEAK 42(17P12) WILD-TYPE     15     54     88     73     64
D80V10, multiclass
        clus
vv       DEL PEAK 42(17P12) MUTATED DEL PEAK 42(17P12) WILD-TYPE
  CLUS_1                         36                           15
  CLUS_2                         70                           54
  CLUS_3                         56                           88
  CLUS_4                         35                           73
  CLUS_5                         28                           64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = DEL PEAK 43(17Q24.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(17Q24.3) MUTATED       44     26     24      9
  DEL PEAK 43(17Q24.3) WILD-TYPE    107     72    158    185
D81V1, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           44                            107
  CLUS_2                           26                             72
  CLUS_3                           24                            158
  CLUS_4                            9                            185
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(17Q24.3) MUTATED       44     31     16
  DEL PEAK 43(17Q24.3) WILD-TYPE    197    130    159
D81V2, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           44                            197
  CLUS_2                           31                            130
  CLUS_3                           16                            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 43(17Q24.3) MUTATED       27     21     18     11
  DEL PEAK 43(17Q24.3) WILD-TYPE    118    116    118     53
D81V3, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           27                            118
  CLUS_2                           21                            116
  CLUS_3                           18                            118
  CLUS_4                           11                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(17Q24.3) MUTATED       47     17     13
  DEL PEAK 43(17Q24.3) WILD-TYPE    226     93     86
D81V4, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           47                            226
  CLUS_2                           17                             93
  CLUS_3                           13                             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(17Q24.3) MUTATED       23     56     20
  DEL PEAK 43(17Q24.3) WILD-TYPE    147    217    133
D81V5, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           23                            147
  CLUS_2                           56                            217
  CLUS_3                           20                            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(17Q24.3) MUTATED       36     15     23     15     10
  DEL PEAK 43(17Q24.3) WILD-TYPE     95    101     75    106    120
D81V6, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           36                             95
  CLUS_2                           15                            101
  CLUS_3                           23                             75
  CLUS_4                           15                            106
  CLUS_5                           10                            120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 43(17Q24.3) MUTATED       26     55     20
  DEL PEAK 43(17Q24.3) WILD-TYPE    141    223    152
D81V7, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           26                            141
  CLUS_2                           55                            223
  CLUS_3                           20                            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(17Q24.3) MUTATED       30     27     17     15     12
  DEL PEAK 43(17Q24.3) WILD-TYPE     97    116    147     79     77
D81V8, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           30                             97
  CLUS_2                           27                            116
  CLUS_3                           17                            147
  CLUS_4                           15                             79
  CLUS_5                           12                             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(17Q24.3) MUTATED       21     29     16      6      8
  DEL PEAK 43(17Q24.3) WILD-TYPE    102    126    105     41     65
D81V9, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           21                            102
  CLUS_2                           29                            126
  CLUS_3                           16                            105
  CLUS_4                            6                             41
  CLUS_5                            8                             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 43(17Q24.3) MUTATED       11     19     18     18     14
  DEL PEAK 43(17Q24.3) WILD-TYPE     40    105    126     90     78
D81V10, multiclass
        clus
vv       DEL PEAK 43(17Q24.3) MUTATED DEL PEAK 43(17Q24.3) WILD-TYPE
  CLUS_1                           11                             40
  CLUS_2                           19                            105
  CLUS_3                           18                            126
  CLUS_4                           18                             90
  CLUS_5                           14                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = DEL PEAK 44(18Q12.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(18Q12.2) MUTATED       92     59    115     26
  DEL PEAK 44(18Q12.2) WILD-TYPE     59     39     67    168
D82V1, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           92                             59
  CLUS_2                           59                             39
  CLUS_3                          115                             67
  CLUS_4                           26                            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(18Q12.2) MUTATED      117     90     63
  DEL PEAK 44(18Q12.2) WILD-TYPE    124     71    112
D82V2, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                          117                            124
  CLUS_2                           90                             71
  CLUS_3                           63                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 44(18Q12.2) MUTATED       67     65     65     28
  DEL PEAK 44(18Q12.2) WILD-TYPE     78     72     71     36
D82V3, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           67                             78
  CLUS_2                           65                             72
  CLUS_3                           65                             71
  CLUS_4                           28                             36
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(18Q12.2) MUTATED      134     53     38
  DEL PEAK 44(18Q12.2) WILD-TYPE    139     57     61
D82V4, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                          134                            139
  CLUS_2                           53                             57
  CLUS_3                           38                             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(18Q12.2) MUTATED       90    136     55
  DEL PEAK 44(18Q12.2) WILD-TYPE     80    137     98
D82V5, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           90                             80
  CLUS_2                          136                            137
  CLUS_3                           55                             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(18Q12.2) MUTATED       82     52     36     64     47
  DEL PEAK 44(18Q12.2) WILD-TYPE     49     64     62     57     83
D82V6, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           82                             49
  CLUS_2                           52                             64
  CLUS_3                           36                             62
  CLUS_4                           64                             57
  CLUS_5                           47                             83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 44(18Q12.2) MUTATED       87    131     71
  DEL PEAK 44(18Q12.2) WILD-TYPE     80    147    101
D82V7, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           87                             80
  CLUS_2                          131                            147
  CLUS_3                           71                            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(18Q12.2) MUTATED       76     69     63     51     30
  DEL PEAK 44(18Q12.2) WILD-TYPE     51     74    101     43     59
D82V8, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           76                             51
  CLUS_2                           69                             74
  CLUS_3                           63                            101
  CLUS_4                           51                             43
  CLUS_5                           30                             59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(18Q12.2) MUTATED       62     83     54     24     21
  DEL PEAK 44(18Q12.2) WILD-TYPE     61     72     67     23     52
D82V9, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           62                             61
  CLUS_2                           83                             72
  CLUS_3                           54                             67
  CLUS_4                           24                             23
  CLUS_5                           21                             52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 44(18Q12.2) MUTATED       32     62     62     38     50
  DEL PEAK 44(18Q12.2) WILD-TYPE     19     62     82     70     42
D82V10, multiclass
        clus
vv       DEL PEAK 44(18Q12.2) MUTATED DEL PEAK 44(18Q12.2) WILD-TYPE
  CLUS_1                           32                             19
  CLUS_2                           62                             62
  CLUS_3                           62                             82
  CLUS_4                           38                             70
  CLUS_5                           50                             42
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = DEL PEAK 45(18Q21.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(18Q21.2) MUTATED       98     67    127     31
  DEL PEAK 45(18Q21.2) WILD-TYPE     53     31     55    163
D83V1, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           98                             53
  CLUS_2                           67                             31
  CLUS_3                          127                             55
  CLUS_4                           31                            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(18Q21.2) MUTATED      137     96     68
  DEL PEAK 45(18Q21.2) WILD-TYPE    104     65    107
D83V2, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                          137                            104
  CLUS_2                           96                             65
  CLUS_3                           68                            107
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 45(18Q21.2) MUTATED       73     70     72     34
  DEL PEAK 45(18Q21.2) WILD-TYPE     72     67     64     30
D83V3, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           73                             72
  CLUS_2                           70                             67
  CLUS_3                           72                             64
  CLUS_4                           34                             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(18Q21.2) MUTATED      146     60     43
  DEL PEAK 45(18Q21.2) WILD-TYPE    127     50     56
D83V4, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                          146                            127
  CLUS_2                           60                             50
  CLUS_3                           43                             56
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(18Q21.2) MUTATED       98    153     60
  DEL PEAK 45(18Q21.2) WILD-TYPE     72    120     93
D83V5, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           98                             72
  CLUS_2                          153                            120
  CLUS_3                           60                             93
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(18Q21.2) MUTATED       86     60     45     68     52
  DEL PEAK 45(18Q21.2) WILD-TYPE     45     56     53     53     78
D83V6, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           86                             45
  CLUS_2                           60                             56
  CLUS_3                           45                             53
  CLUS_4                           68                             53
  CLUS_5                           52                             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 45(18Q21.2) MUTATED       95    149     76
  DEL PEAK 45(18Q21.2) WILD-TYPE     72    129     96
D83V7, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           95                             72
  CLUS_2                          149                            129
  CLUS_3                           76                             96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(18Q21.2) MUTATED       82     83     69     54     32
  DEL PEAK 45(18Q21.2) WILD-TYPE     45     60     95     40     57
D83V8, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           82                             45
  CLUS_2                           83                             60
  CLUS_3                           69                             95
  CLUS_4                           54                             40
  CLUS_5                           32                             57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(18Q21.2) MUTATED       66     91     59     28     25
  DEL PEAK 45(18Q21.2) WILD-TYPE     57     64     62     19     48
D83V9, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           66                             57
  CLUS_2                           91                             64
  CLUS_3                           59                             62
  CLUS_4                           28                             19
  CLUS_5                           25                             48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 45(18Q21.2) MUTATED       32     73     68     43     53
  DEL PEAK 45(18Q21.2) WILD-TYPE     19     51     76     65     39
D83V10, multiclass
        clus
vv       DEL PEAK 45(18Q21.2) MUTATED DEL PEAK 45(18Q21.2) WILD-TYPE
  CLUS_1                           32                             19
  CLUS_2                           73                             51
  CLUS_3                           68                             76
  CLUS_4                           43                             65
  CLUS_5                           53                             39
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(84) Variable = DEL PEAK 46(19P13.3) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(19P13.3) MUTATED       92     51     97      9
  DEL PEAK 46(19P13.3) WILD-TYPE     59     47     85    185
D84V1, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           92                             59
  CLUS_2                           51                             47
  CLUS_3                           97                             85
  CLUS_4                            9                            185
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(19P13.3) MUTATED       91     99     43
  DEL PEAK 46(19P13.3) WILD-TYPE    150     62    132
D84V2, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           91                            150
  CLUS_2                           99                             62
  CLUS_3                           43                            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 46(19P13.3) MUTATED       70     49     39     30
  DEL PEAK 46(19P13.3) WILD-TYPE     75     88     97     34
D84V3, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           70                             75
  CLUS_2                           49                             88
  CLUS_3                           39                             97
  CLUS_4                           30                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(19P13.3) MUTATED      126     35     27
  DEL PEAK 46(19P13.3) WILD-TYPE    147     75     72
D84V4, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                          126                            147
  CLUS_2                           35                             75
  CLUS_3                           27                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(19P13.3) MUTATED       85    125     31
  DEL PEAK 46(19P13.3) WILD-TYPE     85    148    122
D84V5, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           85                             85
  CLUS_2                          125                            148
  CLUS_3                           31                            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(19P13.3) MUTATED       98     47     27     54     15
  DEL PEAK 46(19P13.3) WILD-TYPE     33     69     71     67    115
D84V6, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           98                             33
  CLUS_2                           47                             69
  CLUS_3                           27                             71
  CLUS_4                           54                             67
  CLUS_5                           15                            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 46(19P13.3) MUTATED       98    110     38
  DEL PEAK 46(19P13.3) WILD-TYPE     69    168    134
D84V7, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           98                             69
  CLUS_2                          110                            168
  CLUS_3                           38                            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(19P13.3) MUTATED      100     62     32     43      9
  DEL PEAK 46(19P13.3) WILD-TYPE     27     81    132     51     80
D84V8, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                          100                             27
  CLUS_2                           62                             81
  CLUS_3                           32                            132
  CLUS_4                           43                             51
  CLUS_5                            9                             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(19P13.3) MUTATED       75     71     28     17     21
  DEL PEAK 46(19P13.3) WILD-TYPE     48     84     93     30     52
D84V9, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           75                             48
  CLUS_2                           71                             84
  CLUS_3                           28                             93
  CLUS_4                           17                             30
  CLUS_5                           21                             52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 46(19P13.3) MUTATED       40     65     35     30     42
  DEL PEAK 46(19P13.3) WILD-TYPE     11     59    109     78     50
D84V10, multiclass
        clus
vv       DEL PEAK 46(19P13.3) MUTATED DEL PEAK 46(19P13.3) WILD-TYPE
  CLUS_1                           40                             11
  CLUS_2                           65                             59
  CLUS_3                           35                            109
  CLUS_4                           30                             78
  CLUS_5                           42                             50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = DEL PEAK 47(20P12.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(20P12.1) MUTATED       14     26     23      9
  DEL PEAK 47(20P12.1) WILD-TYPE    137     72    159    185
D85V1, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           14                            137
  CLUS_2                           26                             72
  CLUS_3                           23                            159
  CLUS_4                            9                            185
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20P12.1) MUTATED       29     26     15
  DEL PEAK 47(20P12.1) WILD-TYPE    212    135    160
D85V2, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           29                            212
  CLUS_2                           26                            135
  CLUS_3                           15                            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 47(20P12.1) MUTATED       24     15     11      4
  DEL PEAK 47(20P12.1) WILD-TYPE    121    122    125     60
D85V3, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           24                            121
  CLUS_2                           15                            122
  CLUS_3                           11                            125
  CLUS_4                            4                             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20P12.1) MUTATED       34     10     10
  DEL PEAK 47(20P12.1) WILD-TYPE    239    100     89
D85V4, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           34                            239
  CLUS_2                           10                            100
  CLUS_3                           10                             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20P12.1) MUTATED       26     36      9
  DEL PEAK 47(20P12.1) WILD-TYPE    144    237    144
D85V5, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           26                            144
  CLUS_2                           36                            237
  CLUS_3                            9                            144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(20P12.1) MUTATED       23     21      8     14      5
  DEL PEAK 47(20P12.1) WILD-TYPE    108     95     90    107    125
D85V6, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           23                            108
  CLUS_2                           21                             95
  CLUS_3                            8                             90
  CLUS_4                           14                            107
  CLUS_5                            5                            125
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 47(20P12.1) MUTATED       26     32     14
  DEL PEAK 47(20P12.1) WILD-TYPE    141    246    158
D85V7, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           26                            141
  CLUS_2                           32                            246
  CLUS_3                           14                            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(20P12.1) MUTATED       27     13     16     12      4
  DEL PEAK 47(20P12.1) WILD-TYPE    100    130    148     82     85
D85V8, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           27                            100
  CLUS_2                           13                            130
  CLUS_3                           16                            148
  CLUS_4                           12                             82
  CLUS_5                            4                             85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(20P12.1) MUTATED       16     24     12      8      6
  DEL PEAK 47(20P12.1) WILD-TYPE    107    131    109     39     67
D85V9, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                           16                            107
  CLUS_2                           24                            131
  CLUS_3                           12                            109
  CLUS_4                            8                             39
  CLUS_5                            6                             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 47(20P12.1) MUTATED        7     21     16     10     12
  DEL PEAK 47(20P12.1) WILD-TYPE     44    103    128     98     80
D85V10, multiclass
        clus
vv       DEL PEAK 47(20P12.1) MUTATED DEL PEAK 47(20P12.1) WILD-TYPE
  CLUS_1                            7                             44
  CLUS_2                           21                            103
  CLUS_3                           16                            128
  CLUS_4                           10                             98
  CLUS_5                           12                             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(86) Variable = DEL PEAK 48(21Q11.2) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q11.2) MUTATED       99     59    103     25
  DEL PEAK 48(21Q11.2) WILD-TYPE     52     39     79    169
D86V1, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           99                             52
  CLUS_2                           59                             39
  CLUS_3                          103                             79
  CLUS_4                           25                            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED      120     87     64
  DEL PEAK 48(21Q11.2) WILD-TYPE    121     74    111
D86V2, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                          120                            121
  CLUS_2                           87                             74
  CLUS_3                           64                            111
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 48(21Q11.2) MUTATED       66     58     62     30
  DEL PEAK 48(21Q11.2) WILD-TYPE     79     79     74     34
D86V3, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           66                             79
  CLUS_2                           58                             79
  CLUS_3                           62                             74
  CLUS_4                           30                             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED      126     46     44
  DEL PEAK 48(21Q11.2) WILD-TYPE    147     64     55
D86V4, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                          126                            147
  CLUS_2                           46                             64
  CLUS_3                           44                             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       93    131     50
  DEL PEAK 48(21Q11.2) WILD-TYPE     77    142    103
D86V5, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           93                             77
  CLUS_2                          131                            142
  CLUS_3                           50                            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q11.2) MUTATED       80     52     38     68     36
  DEL PEAK 48(21Q11.2) WILD-TYPE     51     64     60     53     94
D86V6, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           80                             51
  CLUS_2                           52                             64
  CLUS_3                           38                             60
  CLUS_4                           68                             53
  CLUS_5                           36                             94
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 48(21Q11.2) MUTATED       88    129     66
  DEL PEAK 48(21Q11.2) WILD-TYPE     79    149    106
D86V7, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           88                             79
  CLUS_2                          129                            149
  CLUS_3                           66                            106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q11.2) MUTATED       77     75     54     49     28
  DEL PEAK 48(21Q11.2) WILD-TYPE     50     68    110     45     61
D86V8, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           77                             50
  CLUS_2                           75                             68
  CLUS_3                           54                            110
  CLUS_4                           49                             45
  CLUS_5                           28                             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q11.2) MUTATED       68     81     47     26     24
  DEL PEAK 48(21Q11.2) WILD-TYPE     55     74     74     21     49
D86V9, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           68                             55
  CLUS_2                           81                             74
  CLUS_3                           47                             74
  CLUS_4                           26                             21
  CLUS_5                           24                             49
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 48(21Q11.2) MUTATED       31     68     54     45     48
  DEL PEAK 48(21Q11.2) WILD-TYPE     20     56     90     63     44
D86V10, multiclass
        clus
vv       DEL PEAK 48(21Q11.2) MUTATED DEL PEAK 48(21Q11.2) WILD-TYPE
  CLUS_1                           31                             20
  CLUS_2                           68                             56
  CLUS_3                           54                             90
  CLUS_4                           45                             63
  CLUS_5                           48                             44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(87) Variable = DEL PEAK 49(21Q22.13) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.13) MUTATED      105     63    110     27
  DEL PEAK 49(21Q22.13) WILD-TYPE     46     35     72    167
D87V1, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                           105                              46
  CLUS_2                            63                              35
  CLUS_3                           110                              72
  CLUS_4                            27                             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.13) MUTATED      131     86     69
  DEL PEAK 49(21Q22.13) WILD-TYPE    110     75    106
D87V2, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                           131                             110
  CLUS_2                            86                              75
  CLUS_3                            69                             106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 49(21Q22.13) MUTATED       68     63     64     32
  DEL PEAK 49(21Q22.13) WILD-TYPE     77     74     72     32
D87V3, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            68                              77
  CLUS_2                            63                              74
  CLUS_3                            64                              72
  CLUS_4                            32                              32
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.13) MUTATED      129     52     46
  DEL PEAK 49(21Q22.13) WILD-TYPE    144     58     53
D87V4, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                           129                             144
  CLUS_2                            52                              58
  CLUS_3                            46                              53
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.13) MUTATED       98    141     54
  DEL PEAK 49(21Q22.13) WILD-TYPE     72    132     99
D87V5, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            98                              72
  CLUS_2                           141                             132
  CLUS_3                            54                              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.13) MUTATED       82     61     39     72     39
  DEL PEAK 49(21Q22.13) WILD-TYPE     49     55     59     49     91
D87V6, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            82                              49
  CLUS_2                            61                              55
  CLUS_3                            39                              59
  CLUS_4                            72                              49
  CLUS_5                            39                              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 49(21Q22.13) MUTATED       91    144     67
  DEL PEAK 49(21Q22.13) WILD-TYPE     76    134    105
D87V7, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            91                              76
  CLUS_2                           144                             134
  CLUS_3                            67                             105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.13) MUTATED       79     81     61     52     29
  DEL PEAK 49(21Q22.13) WILD-TYPE     48     62    103     42     60
D87V8, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            79                              48
  CLUS_2                            81                              62
  CLUS_3                            61                             103
  CLUS_4                            52                              42
  CLUS_5                            29                              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.13) MUTATED       71     87     46     31     26
  DEL PEAK 49(21Q22.13) WILD-TYPE     52     68     75     16     47
D87V9, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            71                              52
  CLUS_2                            87                              68
  CLUS_3                            46                              75
  CLUS_4                            31                              16
  CLUS_5                            26                              47
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 49(21Q22.13) MUTATED       30     73     62     45     51
  DEL PEAK 49(21Q22.13) WILD-TYPE     21     51     82     63     41
D87V10, multiclass
        clus
vv       DEL PEAK 49(21Q22.13) MUTATED DEL PEAK 49(21Q22.13) WILD-TYPE
  CLUS_1                            30                              21
  CLUS_2                            73                              51
  CLUS_3                            62                              82
  CLUS_4                            45                              63
  CLUS_5                            51                              41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(88) Variable = DEL PEAK 50(22Q11.1) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       92     65     65      8
  DEL PEAK 50(22Q11.1) WILD-TYPE     59     33    117    186
D88V1, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           92                             59
  CLUS_2                           65                             33
  CLUS_3                           65                            117
  CLUS_4                            8                            186
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       98     68     47
  DEL PEAK 50(22Q11.1) WILD-TYPE    143     93    128
D88V2, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           98                            143
  CLUS_2                           68                             93
  CLUS_3                           47                            128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 50(22Q11.1) MUTATED       63     43     43     20
  DEL PEAK 50(22Q11.1) WILD-TYPE     82     94     93     44
D88V3, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           63                             82
  CLUS_2                           43                             94
  CLUS_3                           43                             93
  CLUS_4                           20                             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED      104     38     27
  DEL PEAK 50(22Q11.1) WILD-TYPE    169     72     72
D88V4, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                          104                            169
  CLUS_2                           38                             72
  CLUS_3                           27                             72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       62    118     41
  DEL PEAK 50(22Q11.1) WILD-TYPE    108    155    112
D88V5, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           62                            108
  CLUS_2                          118                            155
  CLUS_3                           41                            112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       72     50     33     37     29
  DEL PEAK 50(22Q11.1) WILD-TYPE     59     66     65     84    101
D88V6, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           72                             59
  CLUS_2                           50                             66
  CLUS_3                           33                             65
  CLUS_4                           37                             84
  CLUS_5                           29                            101
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 50(22Q11.1) MUTATED       69    112     46
  DEL PEAK 50(22Q11.1) WILD-TYPE     98    166    126
D88V7, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           69                             98
  CLUS_2                          112                            166
  CLUS_3                           46                            126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       76     72     34     25     20
  DEL PEAK 50(22Q11.1) WILD-TYPE     51     71    130     69     69
D88V8, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           76                             51
  CLUS_2                           72                             71
  CLUS_3                           34                            130
  CLUS_4                           25                             69
  CLUS_5                           20                             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       47     72     32     20     20
  DEL PEAK 50(22Q11.1) WILD-TYPE     76     83     89     27     53
D88V9, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           47                             76
  CLUS_2                           72                             83
  CLUS_3                           32                             89
  CLUS_4                           20                             27
  CLUS_5                           20                             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 50(22Q11.1) MUTATED       30     59     43     35     24
  DEL PEAK 50(22Q11.1) WILD-TYPE     21     65    101     73     68
D88V10, multiclass
        clus
vv       DEL PEAK 50(22Q11.1) MUTATED DEL PEAK 50(22Q11.1) WILD-TYPE
  CLUS_1                           30                             21
  CLUS_2                           59                             65
  CLUS_3                           43                            101
  CLUS_4                           35                             73
  CLUS_5                           24                             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(89) Variable = DEL PEAK 51(22Q13.31) MUTATION ANALYSIS
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(22Q13.31) MUTATED       85     68     71     11
  DEL PEAK 51(22Q13.31) WILD-TYPE     66     30    111    183
D89V1, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            85                              66
  CLUS_2                            68                              30
  CLUS_3                            71                             111
  CLUS_4                            11                             183
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(22Q13.31) MUTATED      100     72     46
  DEL PEAK 51(22Q13.31) WILD-TYPE    141     89    129
D89V2, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                           100                             141
  CLUS_2                            72                              89
  CLUS_3                            46                             129
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 51(22Q13.31) MUTATED       58     47     46     22
  DEL PEAK 51(22Q13.31) WILD-TYPE     87     90     90     42
D89V3, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            58                              87
  CLUS_2                            47                              90
  CLUS_3                            46                              90
  CLUS_4                            22                              42
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(22Q13.31) MUTATED      106     38     29
  DEL PEAK 51(22Q13.31) WILD-TYPE    167     72     70
D89V4, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                           106                             167
  CLUS_2                            38                              72
  CLUS_3                            29                              70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(22Q13.31) MUTATED       62    120     44
  DEL PEAK 51(22Q13.31) WILD-TYPE    108    153    109
D89V5, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            62                             108
  CLUS_2                           120                             153
  CLUS_3                            44                             109
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(22Q13.31) MUTATED       75     54     31     37     29
  DEL PEAK 51(22Q13.31) WILD-TYPE     56     62     67     84    101
D89V6, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            75                              56
  CLUS_2                            54                              62
  CLUS_3                            31                              67
  CLUS_4                            37                              84
  CLUS_5                            29                             101
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 51(22Q13.31) MUTATED       70    118     44
  DEL PEAK 51(22Q13.31) WILD-TYPE     97    160    128
D89V7, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            70                              97
  CLUS_2                           118                             160
  CLUS_3                            44                             128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(22Q13.31) MUTATED       78     67     40     27     20
  DEL PEAK 51(22Q13.31) WILD-TYPE     49     76    124     67     69
D89V8, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            78                              49
  CLUS_2                            67                              76
  CLUS_3                            40                             124
  CLUS_4                            27                              67
  CLUS_5                            20                              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(22Q13.31) MUTATED       50     75     31     20     25
  DEL PEAK 51(22Q13.31) WILD-TYPE     73     80     90     27     48
D89V9, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            50                              73
  CLUS_2                            75                              80
  CLUS_3                            31                              90
  CLUS_4                            20                              27
  CLUS_5                            25                              48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                 vv
clus                              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 51(22Q13.31) MUTATED       33     60     48     34     26
  DEL PEAK 51(22Q13.31) WILD-TYPE     18     64     96     74     66
D89V10, multiclass
        clus
vv       DEL PEAK 51(22Q13.31) MUTATED DEL PEAK 51(22Q13.31) WILD-TYPE
  CLUS_1                            33                              18
  CLUS_2                            60                              64
  CLUS_3                            48                              96
  CLUS_4                            34                              74
  CLUS_5                            26                              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(90) Variable = DEL PEAK 52(XP22.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP22.2) MUTATED       38     32     70     11
  DEL PEAK 52(XP22.2) WILD-TYPE    113     66    112    183
D90V1, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          38                           113
  CLUS_2                          32                            66
  CLUS_3                          70                           112
  CLUS_4                          11                           183
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP22.2) MUTATED       61     62     22
  DEL PEAK 52(XP22.2) WILD-TYPE    180     99    153
D90V2, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          61                           180
  CLUS_2                          62                            99
  CLUS_3                          22                           153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 52(XP22.2) MUTATED       44     31     30     15
  DEL PEAK 52(XP22.2) WILD-TYPE    101    106    106     49
D90V3, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          44                           101
  CLUS_2                          31                           106
  CLUS_3                          30                           106
  CLUS_4                          15                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP22.2) MUTATED       78     23     19
  DEL PEAK 52(XP22.2) WILD-TYPE    195     87     80
D90V4, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          78                           195
  CLUS_2                          23                            87
  CLUS_3                          19                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP22.2) MUTATED       62     60     23
  DEL PEAK 52(XP22.2) WILD-TYPE    108    213    130
D90V5, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          62                           108
  CLUS_2                          60                           213
  CLUS_3                          23                           130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP22.2) MUTATED       38     23     24     43     17
  DEL PEAK 52(XP22.2) WILD-TYPE     93     93     74     78    113
D90V6, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          38                            93
  CLUS_2                          23                            93
  CLUS_3                          24                            74
  CLUS_4                          43                            78
  CLUS_5                          17                           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 52(XP22.2) MUTATED       60     64     26
  DEL PEAK 52(XP22.2) WILD-TYPE    107    214    146
D90V7, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          60                           107
  CLUS_2                          64                           214
  CLUS_3                          26                           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP22.2) MUTATED       44     30     24     40     12
  DEL PEAK 52(XP22.2) WILD-TYPE     83    113    140     54     77
D90V8, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          44                            83
  CLUS_2                          30                           113
  CLUS_3                          24                           140
  CLUS_4                          40                            54
  CLUS_5                          12                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP22.2) MUTATED       46     38     25     11     18
  DEL PEAK 52(XP22.2) WILD-TYPE     77    117     96     36     55
D90V9, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          46                            77
  CLUS_2                          38                           117
  CLUS_3                          25                            96
  CLUS_4                          11                            36
  CLUS_5                          18                            55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 52(XP22.2) MUTATED       17     32     26     23     40
  DEL PEAK 52(XP22.2) WILD-TYPE     34     92    118     85     52
D90V10, multiclass
        clus
vv       DEL PEAK 52(XP22.2) MUTATED DEL PEAK 52(XP22.2) WILD-TYPE
  CLUS_1                          17                            34
  CLUS_2                          32                            92
  CLUS_3                          26                           118
  CLUS_4                          23                            85
  CLUS_5                          40                            52
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(91) Variable = DEL PEAK 53(XP21.1) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XP21.1) MUTATED       41     27     71      7
  DEL PEAK 53(XP21.1) WILD-TYPE    110     71    111    187
D91V1, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          41                           110
  CLUS_2                          27                            71
  CLUS_3                          71                           111
  CLUS_4                           7                           187
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XP21.1) MUTATED       57     58     23
  DEL PEAK 53(XP21.1) WILD-TYPE    184    103    152
D91V2, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          57                           184
  CLUS_2                          58                           103
  CLUS_3                          23                           152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 53(XP21.1) MUTATED       40     28     31     15
  DEL PEAK 53(XP21.1) WILD-TYPE    105    109    105     49
D91V3, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          40                           105
  CLUS_2                          28                           109
  CLUS_3                          31                           105
  CLUS_4                          15                            49
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XP21.1) MUTATED       73     23     18
  DEL PEAK 53(XP21.1) WILD-TYPE    200     87     81
D91V4, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          73                           200
  CLUS_2                          23                            87
  CLUS_3                          18                            81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XP21.1) MUTATED       66     54     20
  DEL PEAK 53(XP21.1) WILD-TYPE    104    219    133
D91V5, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          66                           104
  CLUS_2                          54                           219
  CLUS_3                          20                           133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XP21.1) MUTATED       36     25     17     47     15
  DEL PEAK 53(XP21.1) WILD-TYPE     95     91     81     74    115
D91V6, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          36                            95
  CLUS_2                          25                            91
  CLUS_3                          17                            81
  CLUS_4                          47                            74
  CLUS_5                          15                           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 53(XP21.1) MUTATED       61     59     23
  DEL PEAK 53(XP21.1) WILD-TYPE    106    219    149
D91V7, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          61                           106
  CLUS_2                          59                           219
  CLUS_3                          23                           149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XP21.1) MUTATED       35     30     24     42     12
  DEL PEAK 53(XP21.1) WILD-TYPE     92    113    140     52     77
D91V8, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          35                            92
  CLUS_2                          30                           113
  CLUS_3                          24                           140
  CLUS_4                          42                            52
  CLUS_5                          12                            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XP21.1) MUTATED       49     39     22      9     12
  DEL PEAK 53(XP21.1) WILD-TYPE     74    116     99     38     61
D91V9, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          49                            74
  CLUS_2                          39                           116
  CLUS_3                          22                            99
  CLUS_4                           9                            38
  CLUS_5                          12                            61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 53(XP21.1) MUTATED       16     29     25     19     42
  DEL PEAK 53(XP21.1) WILD-TYPE     35     95    119     89     50
D91V10, multiclass
        clus
vv       DEL PEAK 53(XP21.1) MUTATED DEL PEAK 53(XP21.1) WILD-TYPE
  CLUS_1                          16                            35
  CLUS_2                          29                            95
  CLUS_3                          25                           119
  CLUS_4                          19                            89
  CLUS_5                          42                            50
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(92) Variable = DEL PEAK 54(XP11.3) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XP11.3) MUTATED       39     31     72      6
  DEL PEAK 54(XP11.3) WILD-TYPE    112     67    110    188
D92V1, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          39                           112
  CLUS_2                          31                            67
  CLUS_3                          72                           110
  CLUS_4                           6                           188
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XP11.3) MUTATED       57     63     20
  DEL PEAK 54(XP11.3) WILD-TYPE    184     98    155
D92V2, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          57                           184
  CLUS_2                          63                            98
  CLUS_3                          20                           155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 54(XP11.3) MUTATED       39     32     34     14
  DEL PEAK 54(XP11.3) WILD-TYPE    106    105    102     50
D92V3, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          39                           106
  CLUS_2                          32                           105
  CLUS_3                          34                           102
  CLUS_4                          14                            50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XP11.3) MUTATED       75     25     19
  DEL PEAK 54(XP11.3) WILD-TYPE    198     85     80
D92V4, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          75                           198
  CLUS_2                          25                            85
  CLUS_3                          19                            80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XP11.3) MUTATED       69     56     17
  DEL PEAK 54(XP11.3) WILD-TYPE    101    217    136
D92V5, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          69                           101
  CLUS_2                          56                           217
  CLUS_3                          17                           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XP11.3) MUTATED       32     28     17     52     13
  DEL PEAK 54(XP11.3) WILD-TYPE     99     88     81     69    117
D92V6, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          32                            99
  CLUS_2                          28                            88
  CLUS_3                          17                            81
  CLUS_4                          52                            69
  CLUS_5                          13                           117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 54(XP11.3) MUTATED       61     61     24
  DEL PEAK 54(XP11.3) WILD-TYPE    106    217    148
D92V7, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          61                           106
  CLUS_2                          61                           217
  CLUS_3                          24                           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XP11.3) MUTATED       35     29     23     48     11
  DEL PEAK 54(XP11.3) WILD-TYPE     92    114    141     46     78
D92V8, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          35                            92
  CLUS_2                          29                           114
  CLUS_3                          23                           141
  CLUS_4                          48                            46
  CLUS_5                          11                            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XP11.3) MUTATED       49     39     23     10     12
  DEL PEAK 54(XP11.3) WILD-TYPE     74    116     98     37     61
D92V9, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          49                            74
  CLUS_2                          39                           116
  CLUS_3                          23                            98
  CLUS_4                          10                            37
  CLUS_5                          12                            61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 54(XP11.3) MUTATED       13     32     21     19     48
  DEL PEAK 54(XP11.3) WILD-TYPE     38     92    123     89     44
D92V10, multiclass
        clus
vv       DEL PEAK 54(XP11.3) MUTATED DEL PEAK 54(XP11.3) WILD-TYPE
  CLUS_1                          13                            38
  CLUS_2                          32                            92
  CLUS_3                          21                           123
  CLUS_4                          19                            89
  CLUS_5                          48                            44
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(93) Variable = DEL PEAK 55(XQ11.2) MUTATION ANALYSIS
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 55(XQ11.2) MUTATED       33     18     49      5
  DEL PEAK 55(XQ11.2) WILD-TYPE    118     80    133    189
D93V1, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          33                           118
  CLUS_2                          18                            80
  CLUS_3                          49                           133
  CLUS_4                           5                           189
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 55(XQ11.2) MUTATED       45     38     14
  DEL PEAK 55(XQ11.2) WILD-TYPE    196    123    161
D93V2, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          45                           196
  CLUS_2                          38                           123
  CLUS_3                          14                           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 55(XQ11.2) MUTATED       34     22     18      9
  DEL PEAK 55(XQ11.2) WILD-TYPE    111    115    118     55
D93V3, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          34                           111
  CLUS_2                          22                           115
  CLUS_3                          18                           118
  CLUS_4                           9                            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 55(XQ11.2) MUTATED       49     22     12
  DEL PEAK 55(XQ11.2) WILD-TYPE    224     88     87
D93V4, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          49                           224
  CLUS_2                          22                            88
  CLUS_3                          12                            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 55(XQ11.2) MUTATED       42     47     12
  DEL PEAK 55(XQ11.2) WILD-TYPE    128    226    141
D93V5, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          42                           128
  CLUS_2                          47                           226
  CLUS_3                          12                           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 55(XQ11.2) MUTATED       29     23     15     24     10
  DEL PEAK 55(XQ11.2) WILD-TYPE    102     93     83     97    120
D93V6, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          29                           102
  CLUS_2                          23                            93
  CLUS_3                          15                            83
  CLUS_4                          24                            97
  CLUS_5                          10                           120
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 55(XQ11.2) MUTATED       36     53     15
  DEL PEAK 55(XQ11.2) WILD-TYPE    131    225    157
D93V7, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          36                           131
  CLUS_2                          53                           225
  CLUS_3                          15                           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 55(XQ11.2) MUTATED       25     32     20     21      6
  DEL PEAK 55(XQ11.2) WILD-TYPE    102    111    144     73     83
D93V8, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          25                           102
  CLUS_2                          32                           111
  CLUS_3                          20                           144
  CLUS_4                          21                            73
  CLUS_5                           6                            83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 55(XQ11.2) MUTATED       30     30     16      5      8
  DEL PEAK 55(XQ11.2) WILD-TYPE     93    125    105     42     65
D93V9, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          30                            93
  CLUS_2                          30                           125
  CLUS_3                          16                           105
  CLUS_4                           5                            42
  CLUS_5                           8                            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                               vv
clus                            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 55(XQ11.2) MUTATED       12     26     19     11     21
  DEL PEAK 55(XQ11.2) WILD-TYPE     39     98    125     97     71
D93V10, multiclass
        clus
vv       DEL PEAK 55(XQ11.2) MUTATED DEL PEAK 55(XQ11.2) WILD-TYPE
  CLUS_1                          12                            39
  CLUS_2                          26                            98
  CLUS_3                          19                           125
  CLUS_4                          11                            97
  CLUS_5                          21                            71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(94) Variable = DEL PEAK 56(XQ21.33) MUTATION ANALYSIS
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 56(XQ21.33) MUTATED       39     19     34      6
  DEL PEAK 56(XQ21.33) WILD-TYPE    112     79    148    188
D94V1, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           39                            112
  CLUS_2                           19                             79
  CLUS_3                           34                            148
  CLUS_4                            6                            188
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 56(XQ21.33) MUTATED       39     39     12
  DEL PEAK 56(XQ21.33) WILD-TYPE    202    122    163
D94V2, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           39                            202
  CLUS_2                           39                            122
  CLUS_3                           12                            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEL PEAK 56(XQ21.33) MUTATED       30     23     17     11
  DEL PEAK 56(XQ21.33) WILD-TYPE    115    114    119     53
D94V3, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           30                            115
  CLUS_2                           23                            114
  CLUS_3                           17                            119
  CLUS_4                           11                             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 56(XQ21.33) MUTATED       50     20     11
  DEL PEAK 56(XQ21.33) WILD-TYPE    223     90     88
D94V4, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           50                            223
  CLUS_2                           20                             90
  CLUS_3                           11                             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 56(XQ21.33) MUTATED       39     45     11
  DEL PEAK 56(XQ21.33) WILD-TYPE    131    228    142
D94V5, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           39                            131
  CLUS_2                           45                            228
  CLUS_3                           11                            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 56(XQ21.33) MUTATED       30     21     14     21      9
  DEL PEAK 56(XQ21.33) WILD-TYPE    101     95     84    100    121
D94V6, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           30                            101
  CLUS_2                           21                             95
  CLUS_3                           14                             84
  CLUS_4                           21                            100
  CLUS_5                            9                            121
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3
  DEL PEAK 56(XQ21.33) MUTATED       37     43     17
  DEL PEAK 56(XQ21.33) WILD-TYPE    130    235    155
D94V7, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           37                            130
  CLUS_2                           43                            235
  CLUS_3                           17                            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 56(XQ21.33) MUTATED       29     30     15     18      5
  DEL PEAK 56(XQ21.33) WILD-TYPE     98    113    149     76     84
D94V8, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           29                             98
  CLUS_2                           30                            113
  CLUS_3                           15                            149
  CLUS_4                           18                             76
  CLUS_5                            5                             84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 56(XQ21.33) MUTATED       26     26     15      8      7
  DEL PEAK 56(XQ21.33) WILD-TYPE     97    129    106     39     66
D94V9, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           26                             97
  CLUS_2                           26                            129
  CLUS_3                           15                            106
  CLUS_4                            8                             39
  CLUS_5                            7                             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                                vv
clus                             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEL PEAK 56(XQ21.33) MUTATED       11     25     15     13     18
  DEL PEAK 56(XQ21.33) WILD-TYPE     40     99    129     95     74
D94V10, multiclass
        clus
vv       DEL PEAK 56(XQ21.33) MUTATED DEL PEAK 56(XQ21.33) WILD-TYPE
  CLUS_1                           11                             40
  CLUS_2                           25                             99
  CLUS_3                           15                            129
  CLUS_4                           13                             95
  CLUS_5                           18                             74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
